Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RFX1P22670 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.65□□□□□ -1.35
RFX1P22670 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFX1P22670 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFX1P22670 OR55B1P-203ENST00000641518 2602 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AC022164.1-201ENST00000568767 2673 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AL031119.1-201ENST00000404707 1879 ntBASIC6.64□□□□□ -1.35
RFX1P22670 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFX1P22670 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFX1P22670 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFX1P22670 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFX1P22670 SNORD1C-201ENST00000363315 78 ntBASIC6.64□□□□□ -1.35
RFX1P22670 RNY4P16-201ENST00000364768 94 ntBASIC6.64□□□□□ -1.35
RFX1P22670 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFX1P22670 AL157702.1-201ENST00000398764 426 ntBASIC6.64□□□□□ -1.35
RFX1P22670 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 AC007283.2-201ENST00000424739 197 ntBASIC6.64□□□□□ -1.35
RFX1P22670 BNIP3P2-201ENST00000441221 577 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AL161636.2-201ENST00000445179 927 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AL035090.1-201ENST00000454835 332 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AC073594.1-201ENST00000462065 364 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AC007998.1-201ENST00000474156 672 ntBASIC6.64□□□□□ -1.35
RFX1P22670 RPL5P12-201ENST00000477071 851 ntBASIC6.64□□□□□ -1.35
RFX1P22670 RN7SL809P-201ENST00000482040 297 ntBASIC6.64□□□□□ -1.35
RFX1P22670 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.64□□□□□ -1.35
RFX1P22670 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 SNORD46.2-201ENST00000516021 102 ntBASIC6.64□□□□□ -1.35
RFX1P22670 RN7SKP238-201ENST00000516483 249 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.64□□□□□ -1.35
RFX1P22670 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AL049779.3-201ENST00000557141 606 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AP001823.1-201ENST00000604056 1003 ntBASIC6.64□□□□□ -1.35
RFX1P22670 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFX1P22670 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.64□□□□□ -1.35
RFX1P22670 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.64□□□□□ -1.35
RFX1P22670 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFX1P22670 SAMMSON-227ENST00000642114 1199 ntBASIC6.64□□□□□ -1.35
RFX1P22670 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
RFX1P22670 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFX1P22670 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.64□□□□□ -1.35
RFX1P22670 AC108467.2-201ENST00000617640 1597 ntBASIC6.64□□□□□ -1.35
RFX1P22670 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RFX1P22670 Z95327.2-201ENST00000414579 1873 ntBASIC6.64□□□□□ -1.35
RFX1P22670 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.64□□□□□ -1.35
RFX1P22670 AC020656.2-201ENST00000613291 5309 ntBASIC6.63□□□□□ -1.35
RFX1P22670 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.63□□□□□ -1.35
RFX1P22670 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
RFX1P22670 RNU6-249P-201ENST00000363016 102 ntBASIC6.63□□□□□ -1.35
RFX1P22670 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 SNORA51.9-201ENST00000384295 124 ntBASIC6.63□□□□□ -1.35
RFX1P22670 Y_RNA.548-201ENST00000384656 105 ntBASIC6.63□□□□□ -1.35
RFX1P22670 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RFX1P22670 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
RFX1P22670 AC004987.3-201ENST00000413879 771 ntBASIC6.63□□□□□ -1.35
RFX1P22670 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 FABP7P1-201ENST00000424004 391 ntBASIC6.63□□□□□ -1.35
RFX1P22670 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.63□□□□□ -1.35
RFX1P22670 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.63□□□□□ -1.35
RFX1P22670 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 DDX3P2-201ENST00000446138 111 ntBASIC6.63□□□□□ -1.35
RFX1P22670 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.63□□□□□ -1.35
RFX1P22670 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.63□□□□□ -1.35
RFX1P22670 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AL356010.1-201ENST00000456364 102 ntBASIC6.63□□□□□ -1.35
RFX1P22670 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
RFX1P22670 RN7SL352P-201ENST00000466002 277 ntBASIC6.63□□□□□ -1.35
RFX1P22670 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.63□□□□□ -1.35
RFX1P22670 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFX1P22670 PCBP2P3-201ENST00000509726 843 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RNA5SP401-201ENST00000515920 127 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RNA5SP271-201ENST00000516700 88 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RNA5SP206-201ENST00000516703 121 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RNU6-410P-201ENST00000517006 107 ntBASIC6.63□□□□□ -1.35
RFX1P22670 RNU6-1220P-201ENST00000517126 108 ntBASIC6.63□□□□□ -1.35
RFX1P22670 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms