Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH3P22223 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH3P22223 MIR4509-3-201ENST00000578671 94 ntBASIC4.21□□□□□ -1.74
CDH3P22223 MIR4509-2-201ENST00000583920 94 ntBASIC4.21□□□□□ -1.74
CDH3P22223 MIR3138-201ENST00000585238 82 ntBASIC4.21□□□□□ -1.74
CDH3P22223 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH3P22223 EIF1P6-201ENST00000600054 334 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH3P22223 AC073387.2-201ENST00000604797 784 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AL590392.1-201ENST00000604960 446 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AL031666.3-201ENST00000609320 1006 ntBASIC4.21□□□□□ -1.74
CDH3P22223 MIR6716-201ENST00000613413 80 ntBASIC4.21□□□□□ -1.74
CDH3P22223 MIR4509-1-201ENST00000618224 94 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC104985.3-201ENST00000623479 597 ntBASIC4.21□□□□□ -1.74
CDH3P22223 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
CDH3P22223 BX649567.1-201ENST00000642071 1134 ntBASIC4.21□□□□□ -1.74
CDH3P22223 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 NSRP1P1-201ENST00000444067 1693 ntBASIC4.21□□□□□ -1.74
CDH3P22223 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH3P22223 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH3P22223 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDH3P22223 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH3P22223 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH3P22223 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH3P22223 RNU6-236P-201ENST00000363886 106 ntBASIC4.2□□□□□ -1.74
CDH3P22223 RNA5SP175-201ENST00000364275 119 ntBASIC4.2□□□□□ -1.74
CDH3P22223 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH3P22223 ZNF602P-201ENST00000405929 924 ntBASIC4.2□□□□□ -1.74
CDH3P22223 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.2□□□□□ -1.74
CDH3P22223 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 MTCYBP32-201ENST00000427945 1084 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AC092634.2-201ENST00000428146 1010 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH3P22223 ELOCP8-201ENST00000439309 332 ntBASIC4.2□□□□□ -1.74
CDH3P22223 RPL23AP52-201ENST00000439311 478 ntBASIC4.2□□□□□ -1.74
CDH3P22223 ELOCP15-201ENST00000442090 332 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AL929288.2-201ENST00000446368 407 ntBASIC4.2□□□□□ -1.74
CDH3P22223 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 RPS27AP15-201ENST00000447672 466 ntBASIC4.2□□□□□ -1.74
CDH3P22223 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 AL009048.1-201ENST00000450437 298 ntBASIC4.2□□□□□ -1.74
CDH3P22223 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH3P22223 AC244505.3-201ENST00000454598 187 ntBASIC4.2□□□□□ -1.74
CDH3P22223 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
CDH3P22223 UQCRHP4-201ENST00000471686 272 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AC119751.1-201ENST00000513357 765 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 SNORA31.9-201ENST00000516429 84 ntBASIC4.2□□□□□ -1.74
CDH3P22223 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
CDH3P22223 RNA5SP309-201ENST00000516670 106 ntBASIC4.2□□□□□ -1.74
CDH3P22223 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH3P22223 HMGB1P1-201ENST00000522557 636 ntBASIC4.2□□□□□ -1.74
CDH3P22223 OR5BC1P-201ENST00000529327 739 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AC092851.1-201ENST00000535964 478 ntBASIC4.2□□□□□ -1.74
CDH3P22223 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 MTCO1P40-201ENST00000574371 625 ntBASIC4.2□□□□□ -1.74
CDH3P22223 RPAP2P1-201ENST00000603626 1168 ntBASIC4.2□□□□□ -1.74
CDH3P22223 Z82195.1-201ENST00000604558 398 ntBASIC4.2□□□□□ -1.74
CDH3P22223 AL160290.3-201ENST00000604869 165 ntBASIC4.2□□□□□ -1.74
CDH3P22223 BNIP3P4-201ENST00000604946 565 ntBASIC4.2□□□□□ -1.74
CDH3P22223 HMGB1P50-201ENST00000605814 607 ntBASIC4.2□□□□□ -1.74
CDH3P22223 Z98200.1-201ENST00000607298 470 ntBASIC4.2□□□□□ -1.74
CDH3P22223 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH3P22223 CR392039.4-201ENST00000624968 501 ntBASIC4.2□□□□□ -1.74
CDH3P22223 OR52H1-202ENST00000641796 1061 ntBASIC4.2□□□□□ -1.74
CDH3P22223 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH3P22223 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CDH3P22223 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH3P22223 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.19□□□□□ -1.74
CDH3P22223 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
CDH3P22223 SNORA11C-201ENST00000408532 129 ntBASIC4.19□□□□□ -1.74
CDH3P22223 RN7SKP167-201ENST00000411047 285 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AMD1P2-201ENST00000412936 992 ntBASIC4.19□□□□□ -1.74
CDH3P22223 PRELID3BP11-201ENST00000414230 479 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
CDH3P22223 RSL24D1P6-201ENST00000426934 401 ntBASIC4.19□□□□□ -1.74
CDH3P22223 PPIAP17-201ENST00000438507 471 ntBASIC4.19□□□□□ -1.74
CDH3P22223 PTGES3P1-201ENST00000439531 483 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 NUTF2P3-201ENST00000448540 384 ntBASIC4.19□□□□□ -1.74
CDH3P22223 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms