Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.69□□□□□ -1.82
SDC1P18827 MRPL35P4-201ENST00000453682 566 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.69□□□□□ -1.82
SDC1P18827 RN7SL93P-201ENST00000463035 293 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC084198.1-201ENST00000477747 402 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC073522.1-201ENST00000483312 377 ntBASIC3.69□□□□□ -1.82
SDC1P18827 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.69□□□□□ -1.82
SDC1P18827 TRBV12-2-201ENST00000489763 344 ntBASIC3.69□□□□□ -1.82
SDC1P18827 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.69□□□□□ -1.82
SDC1P18827 AC005798.1-201ENST00000513715 387 ntBASIC3.69□□□□□ -1.82
SDC1P18827 SNORA31.9-201ENST00000516429 84 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.69□□□□□ -1.82
SDC1P18827 NARSP2-201ENST00000518524 679 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.69□□□□□ -1.82
SDC1P18827 OR4A2P-201ENST00000527276 913 ntBASIC3.69□□□□□ -1.82
SDC1P18827 DEFB109D-201ENST00000529497 240 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC068339.2-201ENST00000534395 618 ntBASIC3.69□□□□□ -1.82
SDC1P18827 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.69□□□□□ -1.82
SDC1P18827 AC135001.1-201ENST00000544546 283 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC025884.1-201ENST00000556034 378 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC095057.3-201ENST00000567102 1157 ntBASIC3.69□□□□□ -1.82
SDC1P18827 MIR6867-201ENST00000610636 67 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC018926.1-201ENST00000616335 435 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AL109620.1-201ENST00000618738 1197 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
SDC1P18827 AL138960.2-201ENST00000625145 535 ntBASIC3.69□□□□□ -1.82
SDC1P18827 MIR6715B-201ENST00000637172 77 ntBASIC3.69□□□□□ -1.82
SDC1P18827 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SDC1P18827 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
SDC1P18827 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.69□□□□□ -1.82
SDC1P18827 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 RLIMP1-201ENST00000339626 1680 ntBASIC3.68□□□□□ -1.82
SDC1P18827 ZNF849P-201ENST00000594711 1566 ntBASIC3.68□□□□□ -1.82
SDC1P18827 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 AC027287.1-201ENST00000553115 1453 ntBASIC3.68□□□□□ -1.82
SDC1P18827 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 AC126755.2-208ENST00000327792 462 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC138969.1-213ENST00000331436 462 ntBASIC3.68□□□□□ -1.82
SDC1P18827 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 RNU6-207P-201ENST00000384137 107 ntBASIC3.68□□□□□ -1.82
SDC1P18827 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.68□□□□□ -1.82
SDC1P18827 MTND2P15-201ENST00000418575 892 ntBASIC3.68□□□□□ -1.82
SDC1P18827 Z97055.1-201ENST00000419730 712 ntBASIC3.68□□□□□ -1.82
SDC1P18827 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 RWDD4P2-201ENST00000426392 563 ntBASIC3.68□□□□□ -1.82
SDC1P18827 RPL7P4-203ENST00000430239 730 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.68□□□□□ -1.82
SDC1P18827 AC092170.1-201ENST00000440211 356 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.68□□□□□ -1.82
SDC1P18827 AC044797.1-201ENST00000445744 679 ntBASIC3.68□□□□□ -1.82
SDC1P18827 TPT1P13-201ENST00000449760 499 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC098824.1-201ENST00000453565 980 ntBASIC3.68□□□□□ -1.82
SDC1P18827 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 RPL21P11-201ENST00000461458 483 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC010618.1-201ENST00000469924 477 ntBASIC3.68□□□□□ -1.82
SDC1P18827 RPS4XP6-201ENST00000477670 797 ntBASIC3.68□□□□□ -1.82
SDC1P18827 PPIAP15-201ENST00000479662 484 ntBASIC3.68□□□□□ -1.82
SDC1P18827 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 AC104108.1-201ENST00000509930 412 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 AC011611.5-201ENST00000552477 578 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.68□□□□□ -1.82
SDC1P18827 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
SDC1P18827 MIR4789-201ENST00000577469 82 ntBASIC3.68□□□□□ -1.82
SDC1P18827 MIR4512-201ENST00000583257 77 ntBASIC3.68□□□□□ -1.82
SDC1P18827 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
SDC1P18827 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
SDC1P18827 AC067852.7-201ENST00000623270 535 ntBASIC3.68□□□□□ -1.82
SDC1P18827 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 AC017104.5-201ENST00000637647 639 ntBASIC3.68□□□□□ -1.82
SDC1P18827 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SDC1P18827 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDC1P18827 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
SDC1P18827 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SDC1P18827 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
SDC1P18827 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SDC1P18827 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SDC1P18827 RNU6-1279P-201ENST00000383917 103 ntBASIC3.67□□□□□ -1.82
SDC1P18827 AL022722.2-201ENST00000402519 180 ntBASIC3.67□□□□□ -1.82
SDC1P18827 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SDC1P18827 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
SDC1P18827 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
SDC1P18827 SNORA11C-201ENST00000408532 129 ntBASIC3.67□□□□□ -1.82
SDC1P18827 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.67□□□□□ -1.82
SDC1P18827 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.67□□□□□ -1.82
SDC1P18827 RPL30P3-201ENST00000424262 333 ntBASIC3.67□□□□□ -1.82
SDC1P18827 OR5AW1P-201ENST00000426334 1006 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms