Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTPN1P18031 AC073136.1-201ENST00000449426 2884 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN1P18031 RN7SKP113-201ENST00000363891 295 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 RNU6-297P-201ENST00000384636 107 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 Y_RNA.554-201ENST00000384672 102 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 RPS24P12-201ENST00000402084 394 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AL390316.1-201ENST00000406279 553 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 RNU6-248P-201ENST00000410720 107 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC073264.1-201ENST00000411508 416 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 USP9YP13-201ENST00000417797 480 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AIMP1P1-201ENST00000418670 937 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN1P18031 AC233981.1-201ENST00000423224 461 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN1P18031 RPL34P20-201ENST00000442771 351 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN1P18031 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN1P18031 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN1P18031 RN7SL97P-201ENST00000486780 299 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 UBA52P3-201ENST00000491303 382 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 RN7SL244P-201ENST00000493405 297 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 KLRA1P-201ENST00000503499 986 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 PRDX4P1-201ENST00000507189 574 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC016559.2-201ENST00000510759 359 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 RNU6-314P-201ENST00000516574 104 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 PAICSP4-201ENST00000517543 1253 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PTPN1P18031 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN1P18031 SNORA59B-202ENST00000578183 701 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC010857.1-201ENST00000606398 594 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AC133644.2-201ENST00000608142 540 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN1P18031 AL627230.1-201ENST00000613077 211 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AL591926.8-201ENST00000616876 211 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 AL356321.1-201ENST00000621360 228 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN1P18031 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN1P18031 AC026523.2-201ENST00000625039 7739 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN1P18031 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 CASC19-221ENST00000641309 1382 ntBASIC5.42□□□□□ -1.54
PTPN1P18031 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN1P18031 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN1P18031 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
PTPN1P18031 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 SNRPEP3-201ENST00000338402 276 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 RNU6-251P-201ENST00000363235 104 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTPN1P18031 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 SNORA2.3-201ENST00000383920 135 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 MIR181A1-201ENST00000385026 110 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 AL139128.1-201ENST00000413921 941 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 HMGB3P23-201ENST00000414981 585 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 GLRXP1-201ENST00000423261 334 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 RBMY2QP-201ENST00000429799 1147 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 ZYG11AP1-201ENST00000430329 837 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 BX323845.1-201ENST00000432417 179 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 RPS26P40-201ENST00000435209 294 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN1P18031 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 WASF1P1-201ENST00000447560 1131 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 TRGVB-201ENST00000453257 471 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AL033528.1-201ENST00000453780 140 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 RPL37P3-201ENST00000456825 293 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 RN7SL610P-201ENST00000463845 291 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC091564.1-201ENST00000464563 479 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 RPL31P58-201ENST00000469001 379 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 LARP1BP2-201ENST00000486594 519 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC022483.1-201ENST00000514020 567 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 MTND5P4-201ENST00000514978 288 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 FTH1P11-201ENST00000517577 551 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms