Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP1P11387 AC244505.7-201ENST00000599675 272 ntBASIC4.37□□□□□ -1.71
TOP1P11387 AL133247.2-201ENST00000603236 482 ntBASIC4.37□□□□□ -1.71
TOP1P11387 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP1P11387 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.37□□□□□ -1.71
TOP1P11387 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
TOP1P11387 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TOP1P11387 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TOP1P11387 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TOP1P11387 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP1P11387 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP1P11387 RNU4-23P-201ENST00000362839 140 ntBASIC4.36□□□□□ -1.71
TOP1P11387 RNU6-819P-201ENST00000364116 107 ntBASIC4.36□□□□□ -1.71
TOP1P11387 SNORA5A-201ENST00000384111 134 ntBASIC4.36□□□□□ -1.71
TOP1P11387 RNU4-31P-201ENST00000384211 141 ntBASIC4.36□□□□□ -1.71
TOP1P11387 MIR200C-201ENST00000384980 68 ntBASIC4.36□□□□□ -1.71
TOP1P11387 CCNB2P1-201ENST00000399411 1150 ntBASIC4.36□□□□□ -1.71
TOP1P11387 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
TOP1P11387 AC004022.2-201ENST00000413824 193 ntBASIC4.36□□□□□ -1.71
TOP1P11387 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.36□□□□□ -1.71
TOP1P11387 AL035423.1-201ENST00000420331 213 ntBASIC4.36□□□□□ -1.71
TOP1P11387 CYP4F29P-201ENST00000420685 446 ntBASIC4.36□□□□□ -1.71
TOP1P11387 HIGD1AP12-201ENST00000427832 281 ntBASIC4.36□□□□□ -1.71
TOP1P11387 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.36□□□□□ -1.71
TOP1P11387 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.36□□□□□ -1.71
TOP1P11387 AC091564.1-201ENST00000464563 479 ntBASIC4.36□□□□□ -1.71
TOP1P11387 AC022034.3-201ENST00000471393 478 ntBASIC4.36□□□□□ -1.71
TOP1P11387 TRBV12-2-201ENST00000489763 344 ntBASIC4.36□□□□□ -1.71
TOP1P11387 MTATP6P22-201ENST00000507369 598 ntBASIC4.36□□□□□ -1.71
TOP1P11387 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.36□□□□□ -1.71
TOP1P11387 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP1P11387 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP1P11387 AC016550.3-201ENST00000515706 767 ntBASIC4.36□□□□□ -1.71
TOP1P11387 RNU6-491P-201ENST00000516099 110 ntBASIC4.36□□□□□ -1.71
TOP1P11387 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP1P11387 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TOP1P11387 TRAV11-201ENST00000539512 339 ntBASIC4.36□□□□□ -1.71
TOP1P11387 GTF2IP22-201ENST00000554443 182 ntBASIC4.36□□□□□ -1.71
TOP1P11387 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.36□□□□□ -1.71
TOP1P11387 C2orf27A-204ENST00000623058 969 ntBASIC4.36□□□□□ -1.71
TOP1P11387 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TOP1P11387 AC112200.1-201ENST00000625015 234 ntBASIC4.36□□□□□ -1.71
TOP1P11387 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TOP1P11387 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP1P11387 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP1P11387 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP1P11387 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
TOP1P11387 AC008725.1-201ENST00000605123 2263 ntBASIC4.35□□□□□ -1.71
TOP1P11387 RNA5SP51-201ENST00000364750 119 ntBASIC4.35□□□□□ -1.71
TOP1P11387 ATP5F1P4-201ENST00000397288 746 ntBASIC4.35□□□□□ -1.71
TOP1P11387 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP1P11387 AC092832.1-201ENST00000422934 400 ntBASIC4.35□□□□□ -1.71
TOP1P11387 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP1P11387 ELOCP11-201ENST00000436690 332 ntBASIC4.35□□□□□ -1.71
TOP1P11387 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP1P11387 ELOCP16-201ENST00000444494 332 ntBASIC4.35□□□□□ -1.71
TOP1P11387 DNAJC19P1-201ENST00000455312 319 ntBASIC4.35□□□□□ -1.71
TOP1P11387 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.35□□□□□ -1.71
TOP1P11387 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP1P11387 SNORA70.17-201ENST00000516449 133 ntBASIC4.35□□□□□ -1.71
TOP1P11387 OR7E13P-201ENST00000526052 910 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AC092851.1-201ENST00000535964 478 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP1P11387 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AC006960.3-201ENST00000561845 705 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AL133457.1-201ENST00000564251 987 ntBASIC4.35□□□□□ -1.71
TOP1P11387 MTND4LP24-201ENST00000572277 291 ntBASIC4.35□□□□□ -1.71
TOP1P11387 MIR4444-1-201ENST00000581696 74 ntBASIC4.35□□□□□ -1.71
TOP1P11387 MIR4444-2-201ENST00000584390 74 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AC115085.1-201ENST00000588924 229 ntBASIC4.35□□□□□ -1.71
TOP1P11387 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP1P11387 VN1R79P-201ENST00000593540 513 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP1P11387 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP1P11387 BRDTP1-201ENST00000605735 677 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AP003117.2-201ENST00000606010 545 ntBASIC4.35□□□□□ -1.71
TOP1P11387 uc_338.32-201ENST00000615087 172 ntBASIC4.35□□□□□ -1.71
TOP1P11387 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP1P11387 AL713922.2-201ENST00000619384 716 ntBASIC4.35□□□□□ -1.71
TOP1P11387 AC244205.2-202ENST00000635781 342 ntBASIC4.35□□□□□ -1.71
TOP1P11387 OR8B1P-202ENST00000641132 1178 ntBASIC4.35□□□□□ -1.71
TOP1P11387 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP1P11387 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TOP1P11387 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP1P11387 AP001486.2-201ENST00000561652 5113 ntBASIC4.34□□□□□ -1.71
TOP1P11387 AC007685.1-201ENST00000329806 452 ntBASIC4.34□□□□□ -1.71
TOP1P11387 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TOP1P11387 SYF2P2-201ENST00000417620 583 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms