Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DUXAP6-201ENST00000553858 601 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL1P09341 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL1P09341 AC021755.1-201ENST00000559747 1447 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.72□□□□□ -1.97
CXCL1P09341 RN7SL600P-201ENST00000581811 299 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 LLPHP1-201ENST00000603571 367 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AP000894.4-201ENST00000610185 483 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 U1.23-201ENST00000610293 146 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 RNU1-68P-201ENST00000615382 146 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 U1.39-201ENST00000621562 146 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AL732618.1-201ENST00000623251 301 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC116563.2-201ENST00000624751 535 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC119674.1-212ENST00000641155 993 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AP000553.6-201ENST00000641242 118 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CXCL1P09341 AL356274.2-201ENST00000624379 3752 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC139713.2-214ENST00000642059 1811 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 MFSD8-233ENST00000641482 4860 ntBASIC2.71□□□□□ -1.97
CXCL1P09341 NMD3P1-201ENST00000439704 1488 ntBASIC2.71□□□□□ -1.97
CXCL1P09341 AC012618.3-205ENST00000637896 1496 ntBASIC2.71□□□□□ -1.97
CXCL1P09341 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC107081.3-201ENST00000612715 2034 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 IGKV7-3-201ENST00000357453 298 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 SNORA31-201ENST00000362607 130 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CXCL1P09341 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 SNORA70E-201ENST00000384492 135 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AL445189.1-201ENST00000405722 338 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 U3.39-201ENST00000408569 239 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 TBCAP1-201ENST00000436520 327 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AL645931.1-201ENST00000439737 410 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL1P09341 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL1P09341 OR2AF1P-201ENST00000454899 889 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 CYCSP53-201ENST00000455540 265 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC105137.1-201ENST00000484355 562 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC005921.1-201ENST00000510589 286 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL1P09341 RNU2-58P-201ENST00000516403 183 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.71□□□□□ -1.98
CXCL1P09341 AP000619.3-201ENST00000535634 1127 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC022884.3-201ENST00000579571 248 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC013244.1-201ENST00000604279 193 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AL365400.2-201ENST00000605604 902 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL1P09341 AC084035.1-201ENST00000634543 607 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 OR52H1-202ENST00000641796 1061 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 MTND5P19-201ENST00000424872 1794 ntBASIC2.71□□□□□ -1.98
CXCL1P09341 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL1P09341 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL1P09341 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL1P09341 ZNF33CP-201ENST00000432492 2030 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CXCL1P09341 RNU4-39P-201ENST00000362455 127 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 U3.6-201ENST00000363622 211 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RNU6-1251P-201ENST00000364502 107 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RNU4-6P-201ENST00000410804 122 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 OR8G2P-201ENST00000412796 908 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC004022.2-201ENST00000413824 193 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 SMC4P1-201ENST00000414479 527 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 MTND4P11-201ENST00000417020 1058 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RBMY2KP-201ENST00000418221 992 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RPA2P2-201ENST00000419698 796 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC093151.1-201ENST00000427711 313 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC010655.1-201ENST00000449336 292 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 PTGES3P5-201ENST00000455109 434 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 MTCYBP14-201ENST00000457471 715 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms