Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 RPL23AP12-201ENST00000467573 473 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 RPL7L1P8-201ENST00000469911 741 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HOXC4P09017 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC4P09017 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC4P09017 RNU6-491P-201ENST00000516099 110 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 SUMO2P20-201ENST00000520803 283 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 AL109741.3-201ENST00000561748 592 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AC006960.3-201ENST00000561845 705 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC244505.7-201ENST00000599675 272 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AL049844.2-201ENST00000604280 628 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AL390816.3-201ENST00000604527 1066 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC4P09017 AC123768.4-201ENST00000616244 701 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC4P09017 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC4P09017 LINC00561-201ENST00000565815 2738 ntBASIC3.71□□□□□ -1.82
HOXC4P09017 AC017002.4-201ENST00000604721 1525 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC4P09017 XIAPP3-201ENST00000312918 795 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 MIR423-201ENST00000362201 94 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 OR6K3-202ENST00000368146 996 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 RNU6-31P-201ENST00000384388 108 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC4P09017 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXC4P09017 JKAMPP1-201ENST00000413804 919 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC4P09017 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 GOT2P5-201ENST00000433995 546 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC4P09017 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC4P09017 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HOXC4P09017 AC021087.2-201ENST00000504656 1203 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC006499.5-201ENST00000505037 514 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC4P09017 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 RNU6-1308P-201ENST00000516817 103 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC074029.2-201ENST00000551045 634 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC4P09017 AC074050.1-201ENST00000563247 211 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC4P09017 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC4P09017 BNIP3P33-201ENST00000598912 569 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC015802.5-201ENST00000607478 399 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC011472.4-201ENST00000615848 491 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 AC112200.1-201ENST00000625015 234 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXC4P09017 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 AC024341.1-201ENST00000526444 1552 ntBASIC3.7□□□□□ -1.82
HOXC4P09017 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC4P09017 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
HOXC4P09017 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC4P09017 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC4P09017 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC4P09017 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC4P09017 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC4P09017 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HOXC4P09017 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC4P09017 Y_RNA.110-201ENST00000363220 99 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC4P09017 RPL31P52-201ENST00000407532 367 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 RNA5SP306-201ENST00000411087 107 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC013404.1-201ENST00000413068 249 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 HIGD1AP12-201ENST00000427832 281 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 RPS26P40-201ENST00000435209 294 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 MTND4P15-201ENST00000437913 1033 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 HMGB3P21-201ENST00000452483 547 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 SNORD105B-201ENST00000458770 79 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC010683.1-201ENST00000473673 378 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC4P09017 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC4P09017 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC4P09017 FTH1P9-201ENST00000513251 355 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC112206.4-201ENST00000515142 405 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC016550.3-201ENST00000515706 767 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC4P09017 AC104997.1-201ENST00000519761 717 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 HIGD1AP18-201ENST00000520730 278 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 OR8K2P-201ENST00000524645 927 ntBASIC3.69□□□□□ -1.82
HOXC4P09017 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXC4P09017 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms