Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A2P05997 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A2P05997 RSL24D1P1-201ENST00000404972 493 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A2P05997 EIF4EP1-201ENST00000422311 642 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 BX119904.1-201ENST00000432026 348 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC025750.2-201ENST00000442609 450 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC023598.1-201ENST00000472521 361 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AP001960.1-201ENST00000506494 658 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 CCNHP1-201ENST00000513311 678 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC113192.3-201ENST00000529152 742 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A2P05997 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A2P05997 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.55□□□□□ -1.68
COL5A2P05997 AC092868.3-201ENST00000560515 784 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A2P05997 AC022146.1-201ENST00000595307 847 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 KLKP1-201ENST00000595979 403 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.55□□□□□ -1.68
COL5A2P05997 AC098483.2-201ENST00000603158 454 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC017076.1-201ENST00000607613 578 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 AC138932.5-201ENST00000617759 563 ntBASIC4.55□□□□□ -1.68
COL5A2P05997 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A2P05997 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.55□□□□□ -1.68
COL5A2P05997 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A2P05997 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL5A2P05997 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A2P05997 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 RNA5SP52-201ENST00000362448 134 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 RNU6-249P-201ENST00000363016 102 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 RNU4-44P-201ENST00000363050 141 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A2P05997 RNU6-891P-201ENST00000384280 111 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
COL5A2P05997 AL158071.1-201ENST00000430315 461 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A2P05997 AC092809.1-201ENST00000441469 474 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A2P05997 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A2P05997 AC025181.1-201ENST00000477507 416 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A2P05997 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A2P05997 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A2P05997 AC004024.1-201ENST00000549244 247 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 AC009712.1-201ENST00000564938 316 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 MTND4LP25-201ENST00000570218 163 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 AC006504.3-201ENST00000586818 523 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 AP003117.1-201ENST00000602771 554 ntBASIC4.54□□□□□ -1.68
COL5A2P05997 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A2P05997 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A2P05997 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A2P05997 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A2P05997 RNA5SP42-201ENST00000364278 115 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 AL355143.1-201ENST00000407101 841 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 RNA5SP296-201ENST00000410523 111 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 VN1R51P-201ENST00000411675 945 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.53□□□□□ -1.68
COL5A2P05997 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.53□□□□□ -1.68
COL5A2P05997 COTL1P1-201ENST00000422309 375 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.53□□□□□ -1.68
COL5A2P05997 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.53□□□□□ -1.68
COL5A2P05997 MOB1AP1-201ENST00000430903 535 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 ZFAND6P1-201ENST00000434138 605 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 RPS20P1-201ENST00000434853 354 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 RPS3AP43-201ENST00000479743 781 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
COL5A2P05997 AC010374.2-201ENST00000512933 535 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 AP006245.1-201ENST00000522549 120 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A2P05997 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 AL121603.1-201ENST00000553815 142 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.53□□□□□ -1.68
COL5A2P05997 AC126365.2-201ENST00000580630 379 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.53□□□□□ -1.68
COL5A2P05997 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.53□□□□□ -1.68
COL5A2P05997 AL732372.2-225ENST00000642124 456 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.53□□□□□ -1.68
COL5A2P05997 AC116158.1-201ENST00000560231 2129 ntBASIC4.53□□□□□ -1.68
COL5A2P05997 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A2P05997 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.53□□□□□ -1.69
COL5A2P05997 ANKRD36P1-201ENST00000344424 659 ntBASIC4.52□□□□□ -1.69
COL5A2P05997 RNU1-140P-201ENST00000365040 165 ntBASIC4.52□□□□□ -1.69
COL5A2P05997 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.52□□□□□ -1.69
COL5A2P05997 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL5A2P05997 AC107083.1-201ENST00000439643 279 ntBASIC4.52□□□□□ -1.69
COL5A2P05997 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL5A2P05997 AC084357.1-201ENST00000473404 255 ntBASIC4.52□□□□□ -1.69
COL5A2P05997 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.52□□□□□ -1.69
COL5A2P05997 AC021678.1-201ENST00000505195 936 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms