Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AIMP1P1-201ENST00000418670 937 ntBASIC3.79□□□□□ -1.8
APOEP02649 AC114814.2-201ENST00000419195 485 ntBASIC3.79□□□□□ -1.8
APOEP02649 MTCO3P21-201ENST00000430791 643 ntBASIC3.79□□□□□ -1.8
APOEP02649 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
APOEP02649 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.79□□□□□ -1.8
APOEP02649 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.79□□□□□ -1.8
APOEP02649 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.79□□□□□ -1.8
APOEP02649 MTND6P6-201ENST00000478031 263 ntBASIC3.79□□□□□ -1.8
APOEP02649 AC005912.1-201ENST00000495392 255 ntBASIC3.79□□□□□ -1.8
APOEP02649 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.79□□□□□ -1.8
APOEP02649 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.79□□□□□ -1.8
APOEP02649 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.79□□□□□ -1.8
APOEP02649 AL389895.1-201ENST00000554127 252 ntBASIC3.79□□□□□ -1.8
APOEP02649 GTF2IP22-201ENST00000554443 182 ntBASIC3.79□□□□□ -1.8
APOEP02649 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.79□□□□□ -1.8
APOEP02649 VN1R84P-201ENST00000593697 235 ntBASIC3.79□□□□□ -1.8
APOEP02649 KLKP1-201ENST00000595979 403 ntBASIC3.79□□□□□ -1.8
APOEP02649 AC006254.3-201ENST00000603353 884 ntBASIC3.79□□□□□ -1.8
APOEP02649 AL049844.2-201ENST00000604280 628 ntBASIC3.79□□□□□ -1.8
APOEP02649 AC007620.3-201ENST00000608131 497 ntBASIC3.79□□□□□ -1.8
APOEP02649 AL034408.1-202ENST00000636088 415 ntBASIC3.79□□□□□ -1.8
APOEP02649 AC012442.3-202ENST00000636742 206 ntBASIC3.79□□□□□ -1.8
APOEP02649 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.79□□□□□ -1.8
APOEP02649 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOEP02649 AC000367.1-201ENST00000452711 1766 ntBASIC3.79□□□□□ -1.8
APOEP02649 SYT14P1-202ENST00000600441 1448 ntBASIC3.78□□□□□ -1.8
APOEP02649 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 AL122126.1-201ENST00000546905 1318 ntBASIC3.78□□□□□ -1.8
APOEP02649 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 RNU1-85P-201ENST00000364127 164 ntBASIC3.78□□□□□ -1.8
APOEP02649 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
APOEP02649 AC002075.2-201ENST00000425207 252 ntBASIC3.78□□□□□ -1.8
APOEP02649 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.78□□□□□ -1.8
APOEP02649 TXNP1-201ENST00000441872 371 ntBASIC3.78□□□□□ -1.8
APOEP02649 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.78□□□□□ -1.8
APOEP02649 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.78□□□□□ -1.8
APOEP02649 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
APOEP02649 AC091564.1-201ENST00000464563 479 ntBASIC3.78□□□□□ -1.8
APOEP02649 AC006511.1-201ENST00000470614 315 ntBASIC3.78□□□□□ -1.8
APOEP02649 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.78□□□□□ -1.8
APOEP02649 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.78□□□□□ -1.8
APOEP02649 SNORA67.7-201ENST00000516664 135 ntBASIC3.78□□□□□ -1.8
APOEP02649 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.78□□□□□ -1.8
APOEP02649 RANP9-201ENST00000519957 271 ntBASIC3.78□□□□□ -1.8
APOEP02649 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.78□□□□□ -1.8
APOEP02649 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.78□□□□□ -1.8
APOEP02649 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.78□□□□□ -1.8
APOEP02649 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.78□□□□□ -1.8
APOEP02649 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 AC145207.9-201ENST00000623802 325 ntBASIC3.78□□□□□ -1.8
APOEP02649 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.78□□□□□ -1.8
APOEP02649 AC119674.1-207ENST00000641355 633 ntBASIC3.78□□□□□ -1.8
APOEP02649 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOEP02649 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.78□□□□□ -1.8
APOEP02649 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
APOEP02649 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
APOEP02649 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.77□□□□□ -1.81
APOEP02649 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 RIOK3P1-201ENST00000418778 1528 ntBASIC3.77□□□□□ -1.81
APOEP02649 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.77□□□□□ -1.81
APOEP02649 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
APOEP02649 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
APOEP02649 U3.15-201ENST00000365398 212 ntBASIC3.77□□□□□ -1.81
APOEP02649 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
APOEP02649 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
APOEP02649 EI24P2-201ENST00000397776 1076 ntBASIC3.77□□□□□ -1.81
APOEP02649 RN7SKP222-201ENST00000410651 315 ntBASIC3.77□□□□□ -1.81
APOEP02649 AC127526.1-201ENST00000417526 366 ntBASIC3.77□□□□□ -1.81
APOEP02649 AC245054.1-201ENST00000420944 258 ntBASIC3.77□□□□□ -1.81
APOEP02649 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 AC073069.1-201ENST00000428657 441 ntBASIC3.77□□□□□ -1.81
APOEP02649 GOT2P5-201ENST00000433995 546 ntBASIC3.77□□□□□ -1.81
APOEP02649 NDUFB1P1-201ENST00000435191 180 ntBASIC3.77□□□□□ -1.81
APOEP02649 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.77□□□□□ -1.81
APOEP02649 RPL21P129-201ENST00000491732 478 ntBASIC3.77□□□□□ -1.81
APOEP02649 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
APOEP02649 HAUS1P1-201ENST00000505275 832 ntBASIC3.77□□□□□ -1.81
APOEP02649 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.77□□□□□ -1.81
APOEP02649 AC104619.4-201ENST00000510773 249 ntBASIC3.77□□□□□ -1.81
APOEP02649 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.77□□□□□ -1.81
APOEP02649 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.77□□□□□ -1.81
APOEP02649 AC026403.1-201ENST00000518938 295 ntBASIC3.77□□□□□ -1.81
APOEP02649 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.77□□□□□ -1.81
APOEP02649 MTND5P21-201ENST00000531961 522 ntBASIC3.77□□□□□ -1.81
APOEP02649 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.77□□□□□ -1.81
APOEP02649 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.77□□□□□ -1.81
APOEP02649 AC010591.1-201ENST00000603941 649 ntBASIC3.77□□□□□ -1.81
APOEP02649 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.77□□□□□ -1.81
APOEP02649 AC069209.1-201ENST00000619282 651 ntBASIC3.77□□□□□ -1.81
APOEP02649 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms