Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 ETF1P3-201ENST00000430422 1160 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 MTCYBP14-201ENST00000457471 715 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC112198.1-201ENST00000505369 1220 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 RNU6-1231P-201ENST00000517185 103 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 OR4R3P-201ENST00000525084 838 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC009303.3-201ENST00000591103 736 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 SNORA35B-201ENST00000607417 129 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC116447.1-201ENST00000613153 453 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTDNEP1O95476 CR383658.2-201ENST00000547576 1525 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTDNEP1O95476 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTDNEP1O95476 RNU6-697P-201ENST00000363348 107 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTDNEP1O95476 RPL17P36-201ENST00000420302 549 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTDNEP1O95476 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 UBE2V2P1-201ENST00000434717 398 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC008155.2-201ENST00000464337 397 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 SEPT7P6-201ENST00000469999 1143 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 RPL7P47-201ENST00000497299 556 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC093311.1-201ENST00000506586 2021 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC018797.3-201ENST00000513388 1241 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC107934.2-201ENST00000518653 310 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDNEP1O95476 AC007496.3-201ENST00000624987 3443 ntBASIC3.91□□□□□ -1.78
CTDNEP1O95476 AF117829.1-206ENST00000621883 3802 ntBASIC3.9□□□□□ -1.78
CTDNEP1O95476 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.9□□□□□ -1.78
CTDNEP1O95476 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 RNU6-603P-201ENST00000411403 107 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 RPS7P13-201ENST00000413955 498 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC093084.1-201ENST00000424233 687 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 HMGN2P31-201ENST00000432430 273 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 ATP5C1P1-201ENST00000441945 895 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 CDC27P1-201ENST00000445384 715 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 S100A11P1-201ENST00000477525 312 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 SCARNA20.6-201ENST00000517251 106 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 IGKV2D-19-201ENST00000523346 262 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC135001.1-201ENST00000544546 283 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC015802.5-201ENST00000607478 399 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC078899.5-201ENST00000612475 178 ntBASIC3.9□□□□□ -1.79
CTDNEP1O95476 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTDNEP1O95476 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDNEP1O95476 AC009313.2-201ENST00000417893 1941 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC110792.3-201ENST00000595906 1614 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 RNA5SP119-201ENST00000362715 117 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 RN7SKP44-201ENST00000363602 316 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC240504.1-201ENST00000395709 845 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 BX323014.1-201ENST00000412876 237 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC245052.5-201ENST00000416320 649 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 ELOCP10-201ENST00000440624 327 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms