Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF40O75150 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF40O75150 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF40O75150 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 SOCS5P3-201ENST00000425115 1576 ntBASIC7.18□□□□□ -1.26
RNF40O75150 RNU6-1159P-201ENST00000362933 107 ntBASIC7.18□□□□□ -1.26
RNF40O75150 RNA5SP382-201ENST00000363355 112 ntBASIC7.18□□□□□ -1.26
RNF40O75150 SNORA70H-201ENST00000383910 135 ntBASIC7.18□□□□□ -1.26
RNF40O75150 SNORA70J-201ENST00000384182 135 ntBASIC7.18□□□□□ -1.26
RNF40O75150 Y_RNA.462-201ENST00000384268 102 ntBASIC7.18□□□□□ -1.26
RNF40O75150 PCNPP3-201ENST00000393579 471 ntBASIC7.18□□□□□ -1.26
RNF40O75150 AC110754.1-201ENST00000399740 601 ntBASIC7.18□□□□□ -1.26
RNF40O75150 RNU2-23P-201ENST00000410545 195 ntBASIC7.18□□□□□ -1.26
RNF40O75150 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF40O75150 AL034379.1-201ENST00000423216 253 ntBASIC7.18□□□□□ -1.26
RNF40O75150 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF40O75150 AC010881.1-201ENST00000433830 235 ntBASIC7.18□□□□□ -1.26
RNF40O75150 TIMM9P1-201ENST00000436122 256 ntBASIC7.18□□□□□ -1.26
RNF40O75150 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF40O75150 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF40O75150 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF40O75150 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF40O75150 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF40O75150 HMGB3P30-201ENST00000457863 606 ntBASIC7.18□□□□□ -1.26
RNF40O75150 RN7SL83P-201ENST00000468131 297 ntBASIC7.18□□□□□ -1.26
RNF40O75150 SCARNA6-201ENST00000515982 265 ntBASIC7.18□□□□□ -1.26
RNF40O75150 RNU6-120P-201ENST00000516077 103 ntBASIC7.18□□□□□ -1.26
RNF40O75150 Y_RNA.673-201ENST00000516306 88 ntBASIC7.18□□□□□ -1.26
RNF40O75150 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 AC008687.2-201ENST00000597865 520 ntBASIC7.18□□□□□ -1.26
RNF40O75150 AC009779.6-201ENST00000603972 165 ntBASIC7.18□□□□□ -1.26
RNF40O75150 HMGB1P50-201ENST00000605814 607 ntBASIC7.18□□□□□ -1.26
RNF40O75150 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF40O75150 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.18□□□□□ -1.26
RNF40O75150 MIR6503-201ENST00000622884 86 ntBASIC7.18□□□□□ -1.26
RNF40O75150 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF40O75150 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 AC235565.1-201ENST00000456962 1325 ntBASIC7.18□□□□□ -1.26
RNF40O75150 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
RNF40O75150 AL121950.1-201ENST00000624993 2077 ntBASIC7.18□□□□□ -1.26
RNF40O75150 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF40O75150 MAPK10-261ENST00000641050 3109 ntBASIC7.18□□□□□ -1.26
RNF40O75150 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF40O75150 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
RNF40O75150 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.17□□□□□ -1.26
RNF40O75150 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF40O75150 AC096921.2-201ENST00000561507 1916 ntBASIC7.17□□□□□ -1.26
RNF40O75150 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF40O75150 RN7SKP189-201ENST00000365042 330 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RN7SKP187-201ENST00000365536 330 ntBASIC7.17□□□□□ -1.26
RNF40O75150 Y_RNA.376-201ENST00000365638 108 ntBASIC7.17□□□□□ -1.26
RNF40O75150 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF40O75150 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF40O75150 RNU6-886P-201ENST00000384319 105 ntBASIC7.17□□□□□ -1.26
RNF40O75150 Y_RNA.473-201ENST00000384333 102 ntBASIC7.17□□□□□ -1.26
RNF40O75150 Y_RNA.478-201ENST00000384358 107 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RNU6-1093P-201ENST00000391194 107 ntBASIC7.17□□□□□ -1.26
RNF40O75150 U3.25-201ENST00000391209 220 ntBASIC7.17□□□□□ -1.26
RNF40O75150 ARF4P3-201ENST00000397387 509 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RNU6-1050P-201ENST00000410388 107 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPL7AP51-201ENST00000422016 760 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF40O75150 AC000089.1-201ENST00000424559 801 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AHCYP8-201ENST00000425108 209 ntBASIC7.17□□□□□ -1.26
RNF40O75150 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF40O75150 GAS5-223ENST00000452197 483 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF40O75150 PCMTD1P1-201ENST00000455560 355 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AC011225.1-201ENST00000457751 369 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPS23P3-201ENST00000470993 430 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPL7P5-201ENST00000471472 736 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPL23AP8-201ENST00000479812 475 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPL21P93-201ENST00000480465 489 ntBASIC7.17□□□□□ -1.26
RNF40O75150 RPL7P6-201ENST00000480903 738 ntBASIC7.17□□□□□ -1.26
RNF40O75150 TXNP6-201ENST00000510190 310 ntBASIC7.17□□□□□ -1.26
RNF40O75150 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AC093878.1-201ENST00000515630 432 ntBASIC7.17□□□□□ -1.26
RNF40O75150 EEF1B2P2-201ENST00000519625 676 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF40O75150 AC078899.1-201ENST00000521432 1185 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF40O75150 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms