Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC023510.2-201ENST00000622162 746 ntBASIC4.01□□□□□ -1.77
SNX3O60493 AC109454.4-201ENST00000623411 649 ntBASIC4.01□□□□□ -1.77
SNX3O60493 AC140479.6-201ENST00000633535 357 ntBASIC4.01□□□□□ -1.77
SNX3O60493 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX3O60493 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX3O60493 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX3O60493 AC000367.1-201ENST00000452711 1766 ntBASIC4.01□□□□□ -1.77
SNX3O60493 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SNX3O60493 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX3O60493 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX3O60493 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX3O60493 AL590763.1-201ENST00000398297 1545 ntBASIC4□□□□□ -1.77
SNX3O60493 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 OR5P1P-201ENST00000299512 925 ntBASIC4□□□□□ -1.77
SNX3O60493 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 RNU4-51P-201ENST00000364206 140 ntBASIC4□□□□□ -1.77
SNX3O60493 AC019155.1-201ENST00000382242 574 ntBASIC4□□□□□ -1.77
SNX3O60493 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 SNORA11.3-201ENST00000408471 128 ntBASIC4□□□□□ -1.77
SNX3O60493 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 HIGD1AP12-201ENST00000427832 281 ntBASIC4□□□□□ -1.77
SNX3O60493 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 AC010881.1-201ENST00000433830 235 ntBASIC4□□□□□ -1.77
SNX3O60493 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 AC109327.1-201ENST00000471666 403 ntBASIC4□□□□□ -1.77
SNX3O60493 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4□□□□□ -1.77
SNX3O60493 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4□□□□□ -1.77
SNX3O60493 AC011005.3-201ENST00000491624 395 ntBASIC4□□□□□ -1.77
SNX3O60493 RPS23P1-201ENST00000491662 432 ntBASIC4□□□□□ -1.77
SNX3O60493 RPL21P131-201ENST00000497298 483 ntBASIC4□□□□□ -1.77
SNX3O60493 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 OR5H4P-201ENST00000510851 923 ntBASIC4□□□□□ -1.77
SNX3O60493 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 AC018797.3-201ENST00000513388 1241 ntBASIC4□□□□□ -1.77
SNX3O60493 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4□□□□□ -1.77
SNX3O60493 AC110760.3-202ENST00000515177 371 ntBASIC4□□□□□ -1.77
SNX3O60493 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
SNX3O60493 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 AC091515.1-201ENST00000548110 679 ntBASIC4□□□□□ -1.77
SNX3O60493 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 MIR4760-201ENST00000585040 80 ntBASIC4□□□□□ -1.77
SNX3O60493 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 AL391001.1-201ENST00000602747 715 ntBASIC4□□□□□ -1.77
SNX3O60493 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4□□□□□ -1.77
SNX3O60493 RPP40P2-201ENST00000603596 712 ntBASIC4□□□□□ -1.77
SNX3O60493 AC114878.2-201ENST00000604863 1251 ntBASIC4□□□□□ -1.77
SNX3O60493 AL359535.1-201ENST00000612100 1087 ntBASIC4□□□□□ -1.77
SNX3O60493 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4□□□□□ -1.77
SNX3O60493 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4□□□□□ -1.77
SNX3O60493 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4□□□□□ -1.77
SNX3O60493 MIR6864-201ENST00000617935 70 ntBASIC4□□□□□ -1.77
SNX3O60493 AC009704.2-201ENST00000618739 483 ntBASIC4□□□□□ -1.77
SNX3O60493 SNORA11.6-201ENST00000619030 128 ntBASIC4□□□□□ -1.77
SNX3O60493 AC091046.2-201ENST00000620775 665 ntBASIC4□□□□□ -1.77
SNX3O60493 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4□□□□□ -1.77
SNX3O60493 AC087821.2-201ENST00000637086 450 ntBASIC4□□□□□ -1.77
SNX3O60493 UOX-205ENST00000640983 544 ntTSL 4 BASIC4□□□□□ -1.77
SNX3O60493 CASC19-222ENST00000641321 1173 ntBASIC4□□□□□ -1.77
SNX3O60493 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX3O60493 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4□□□□□ -1.77
SNX3O60493 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SNX3O60493 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 CIR1P2-201ENST00000514821 1342 ntBASIC3.99□□□□□ -1.77
SNX3O60493 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SNX3O60493 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 RN7SKP149-201ENST00000363008 344 ntBASIC3.99□□□□□ -1.77
SNX3O60493 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 Y_RNA.472-201ENST00000384322 102 ntBASIC3.99□□□□□ -1.77
SNX3O60493 SNORD116-12-201ENST00000384468 92 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 AC127526.1-201ENST00000417526 366 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX3O60493 NANOGP5-201ENST00000424456 877 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AL513175.1-201ENST00000431492 780 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 RPL23AP52-201ENST00000439311 478 ntBASIC3.99□□□□□ -1.77
SNX3O60493 PPIAP20-201ENST00000449839 135 ntBASIC3.99□□□□□ -1.77
SNX3O60493 HIGD1AP8-201ENST00000453927 274 ntBASIC3.99□□□□□ -1.77
SNX3O60493 RPL21P71-201ENST00000465598 459 ntBASIC3.99□□□□□ -1.77
SNX3O60493 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms