Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 AC092435.4-201ENST00000623012 4159 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC025263.3-201ENST00000622965 1396 ntBASIC4.43□□□□□ -1.7
LDB2O43679 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 AP000776.1-201ENST00000530032 1663 ntBASIC4.43□□□□□ -1.7
LDB2O43679 FAM3C2-201ENST00000312214 681 ntBASIC4.43□□□□□ -1.7
LDB2O43679 IL6STP1-201ENST00000346911 1020 ntBASIC4.43□□□□□ -1.7
LDB2O43679 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 RNU6-178P-201ENST00000384631 104 ntBASIC4.43□□□□□ -1.7
LDB2O43679 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
LDB2O43679 MIR3065-201ENST00000390137 79 ntBASIC4.43□□□□□ -1.7
LDB2O43679 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 NCSTNP1-201ENST00000406229 144 ntBASIC4.43□□□□□ -1.7
LDB2O43679 RN7SKP182-201ENST00000410772 298 ntBASIC4.43□□□□□ -1.7
LDB2O43679 SNRPFP1-201ENST00000414761 252 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 AC234781.2-201ENST00000426370 994 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 AC092017.2-201ENST00000427600 362 ntBASIC4.43□□□□□ -1.7
LDB2O43679 MTCO3P21-201ENST00000430791 643 ntBASIC4.43□□□□□ -1.7
LDB2O43679 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 AC114495.1-201ENST00000441274 436 ntBASIC4.43□□□□□ -1.7
LDB2O43679 MTND3P1-201ENST00000441336 220 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC092809.1-201ENST00000441469 474 ntBASIC4.43□□□□□ -1.7
LDB2O43679 RPS7P5-201ENST00000441482 581 ntBASIC4.43□□□□□ -1.7
LDB2O43679 RPL21P133-201ENST00000443666 476 ntBASIC4.43□□□□□ -1.7
LDB2O43679 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LDB2O43679 YWHAQP9-201ENST00000445891 512 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 MTCO2P25-201ENST00000447065 681 ntBASIC4.43□□□□□ -1.7
LDB2O43679 VN1R32P-201ENST00000452234 905 ntBASIC4.43□□□□□ -1.7
LDB2O43679 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 RPL23AP12-201ENST00000467573 473 ntBASIC4.43□□□□□ -1.7
LDB2O43679 RPL21P126-201ENST00000470049 478 ntBASIC4.43□□□□□ -1.7
LDB2O43679 RPS3AP43-201ENST00000479743 781 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC108734.3-201ENST00000481241 1165 ntBASIC4.43□□□□□ -1.7
LDB2O43679 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 DYNLL1P6-201ENST00000503440 264 ntBASIC4.43□□□□□ -1.7
LDB2O43679 IGBP1P5-201ENST00000507524 1000 ntBASIC4.43□□□□□ -1.7
LDB2O43679 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.43□□□□□ -1.7
LDB2O43679 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.43□□□□□ -1.7
LDB2O43679 MIR4277-201ENST00000578298 84 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC022069.1-201ENST00000582910 658 ntBASIC4.43□□□□□ -1.7
LDB2O43679 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 MIR5096-201ENST00000583713 70 ntBASIC4.43□□□□□ -1.7
LDB2O43679 MIR4715-201ENST00000584117 79 ntBASIC4.43□□□□□ -1.7
LDB2O43679 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 AC106791.2-201ENST00000604680 391 ntBASIC4.43□□□□□ -1.7
LDB2O43679 Z98200.1-201ENST00000607298 470 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC012409.3-201ENST00000611343 981 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AP005019.3-201ENST00000620418 560 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LDB2O43679 AC079248.2-201ENST00000623779 326 ntBASIC4.43□□□□□ -1.7
LDB2O43679 AC015726.3-201ENST00000624501 418 ntBASIC4.43□□□□□ -1.7
LDB2O43679 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.43□□□□□ -1.7
LDB2O43679 MAPK10-304ENST00000641341 3984 ntBASIC4.43□□□□□ -1.7
LDB2O43679 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 MAPK10-320ENST00000641462 6696 ntBASIC4.43□□□□□ -1.7
LDB2O43679 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LDB2O43679 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDB2O43679 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDB2O43679 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDB2O43679 AC105074.1-201ENST00000623380 3095 ntBASIC4.42□□□□□ -1.7
LDB2O43679 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.42□□□□□ -1.7
LDB2O43679 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.42□□□□□ -1.7
LDB2O43679 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.42□□□□□ -1.7
LDB2O43679 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.42□□□□□ -1.7
LDB2O43679 AC139713.2-214ENST00000642059 1811 ntBASIC4.42□□□□□ -1.7
LDB2O43679 AL450326.2-201ENST00000421913 1962 ntBASIC4.42□□□□□ -1.7
LDB2O43679 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
LDB2O43679 AC008033.1-201ENST00000216407 1162 ntBASIC4.42□□□□□ -1.7
LDB2O43679 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
LDB2O43679 AC126755.2-208ENST00000327792 462 ntBASIC4.42□□□□□ -1.7
LDB2O43679 AC138969.1-213ENST00000331436 462 ntBASIC4.42□□□□□ -1.7
LDB2O43679 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDB2O43679 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
LDB2O43679 SNORD65.1-201ENST00000390889 71 ntBASIC4.42□□□□□ -1.7
LDB2O43679 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDB2O43679 TAF9BP1-201ENST00000396646 746 ntBASIC4.42□□□□□ -1.7
LDB2O43679 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDB2O43679 NRBF2P2-201ENST00000413087 861 ntBASIC4.42□□□□□ -1.7
LDB2O43679 OR51A3P-201ENST00000413596 924 ntBASIC4.42□□□□□ -1.7
LDB2O43679 TMSB10P2-201ENST00000416049 131 ntBASIC4.42□□□□□ -1.7
LDB2O43679 MRPS36P1-201ENST00000421291 307 ntBASIC4.42□□□□□ -1.7
LDB2O43679 RPL18P10-201ENST00000425606 538 ntBASIC4.42□□□□□ -1.7
LDB2O43679 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms