Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.92□□□□□ -1.78
LRRTM2O43300 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.92□□□□□ -1.78
LRRTM2O43300 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.92□□□□□ -1.78
LRRTM2O43300 RPL23AP97-201ENST00000568955 471 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 RN7SL600P-201ENST00000581811 299 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 BPIFA4P-203ENST00000603168 689 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 AC026741.1-201ENST00000605892 482 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 AC113194.1-201ENST00000606037 500 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.92□□□□□ -1.78
LRRTM2O43300 AC007546.1-201ENST00000619452 559 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.92□□□□□ -1.78
LRRTM2O43300 AC006065.5-201ENST00000623427 349 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 AC004777.1-201ENST00000624317 287 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 CDRT1-208ENST00000630868 794 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
LRRTM2O43300 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.92□□□□□ -1.78
LRRTM2O43300 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 LINC00622-201ENST00000562811 1570 ntBASIC3.92□□□□□ -1.78
LRRTM2O43300 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.92□□□□□ -1.78
LRRTM2O43300 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
LRRTM2O43300 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
LRRTM2O43300 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRRTM2O43300 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LRRTM2O43300 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRTM2O43300 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRTM2O43300 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LRRTM2O43300 MIR16-2-201ENST00000362117 81 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 RNU6-761P-201ENST00000384148 107 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 RPS20P14-201ENST00000412545 360 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 MTCO3P4-201ENST00000419236 787 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 YWHAEP5-201ENST00000431545 765 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 MRPL50P1-201ENST00000431951 384 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AL035458.1-201ENST00000433096 585 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC007389.2-201ENST00000434630 306 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRTM2O43300 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 UBE2V1P3-201ENST00000439651 417 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 ARL5AP2-201ENST00000444698 533 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRTM2O43300 RPS20P21-201ENST00000466859 343 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC146944.2-203ENST00000502493 354 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 OR5H3P-201ENST00000502817 919 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC139783.2-201ENST00000504847 1145 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 NAMPTP2-201ENST00000505629 1115 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC017037.1-201ENST00000508460 471 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC139495.1-202ENST00000513164 354 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC108064.1-201ENST00000513791 460 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 RNA5SP49-201ENST00000516450 115 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC105233.3-201ENST00000531125 744 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.91□□□□□ -1.78
LRRTM2O43300 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC053481.4-201ENST00000583164 216 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRTM2O43300 MIR432-201ENST00000606207 94 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 RNU4-89P-201ENST00000607443 133 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 OR2BH1P-201ENST00000608850 864 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC006946.3-201ENST00000609791 756 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AL049777.1-201ENST00000622740 518 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AL138955.1-201ENST00000622881 1040 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 AC138649.5-201ENST00000637456 137 ntBASIC3.91□□□□□ -1.78
LRRTM2O43300 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
LRRTM2O43300 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRTM2O43300 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRTM2O43300 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRTM2O43300 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRTM2O43300 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRTM2O43300 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms