Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 RN7SKP156-201ENST00000410308 342 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 SNORA57.3-201ENST00000411095 141 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 CYCSP19-201ENST00000411715 316 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC114814.2-201ENST00000419195 485 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 ELOCP6-201ENST00000429066 328 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN3O15551 FTH1P6-201ENST00000430768 320 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC122718.1-201ENST00000439448 744 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 RPS7P5-201ENST00000441482 581 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 CDC27P1-201ENST00000445384 715 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN3O15551 ELOCP12-201ENST00000458706 328 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 FAM133DP-201ENST00000464802 691 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC007688.1-201ENST00000475592 759 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC108729.2-201ENST00000476543 840 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC108941.1-201ENST00000502853 530 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN3O15551 SCARNA14-201ENST00000516903 136 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 RN7SKP283-201ENST00000517197 270 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 AC135001.1-201ENST00000544546 283 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN3O15551 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN3O15551 OR4H6P-202ENST00000603819 340 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AL392112.1-201ENST00000605115 829 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AP003117.2-201ENST00000606010 545 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AL354760.1-201ENST00000608357 643 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 AL161637.1-201ENST00000622380 412 ntBASIC4.18□□□□□ -1.74
CLDN3O15551 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN3O15551 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN3O15551 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 RNU6-252P-201ENST00000363232 107 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN3O15551 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 MIR134-201ENST00000385258 73 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLDN3O15551 AL590704.1-201ENST00000402856 794 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 HMGB3P18-201ENST00000406327 590 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 RNU2-65P-201ENST00000410162 185 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 FAR1P1-201ENST00000427163 934 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 AL591419.1-201ENST00000427423 339 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 OR52A4P-202ENST00000481634 799 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN3O15551 AL035404.1-201ENST00000497982 568 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 AC010342.1-201ENST00000514047 877 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN3O15551 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN3O15551 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 AL360157.1-201ENST00000565962 87 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC087499.8-201ENST00000578406 226 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC006130.2-201ENST00000586202 326 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN3O15551 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN3O15551 U6.107-201ENST00000637108 79 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN3O15551 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CLDN3O15551 AC095050.2-201ENST00000510748 1458 ntBASIC4.17□□□□□ -1.74
CLDN3O15551 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN3O15551 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN3O15551 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN3O15551 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN3O15551 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN3O15551 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN3O15551 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN3O15551 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN3O15551 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN3O15551 ZNF603P-201ENST00000405613 487 ntBASIC4.16□□□□□ -1.74
CLDN3O15551 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN3O15551 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN3O15551 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN3O15551 NPM1P34-201ENST00000428821 893 ntBASIC4.16□□□□□ -1.74
CLDN3O15551 AF228730.2-201ENST00000438784 848 ntBASIC4.16□□□□□ -1.74
CLDN3O15551 RRM2P4-201ENST00000441721 562 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms