Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM1O00151 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AC125494.3-201ENST00000602759 455 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM1O00151 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC006249.1-201ENST00000621223 471 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 MIR7153-201ENST00000637758 57 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AC000367.1-201ENST00000452711 1766 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM1O00151 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 EIF1P3-201ENST00000423841 334 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC016712.1-201ENST00000431088 378 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.89□□□□□ -1.79
PDLIM1O00151 ELOCP11-201ENST00000436690 332 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.89□□□□□ -1.79
PDLIM1O00151 VN1R25P-201ENST00000443385 738 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 ELOCP16-201ENST00000444494 332 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 RPL12P26-201ENST00000452430 487 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 VN1R40P-201ENST00000455196 941 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 RN7SL98P-201ENST00000462271 300 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 HMGB1P23-201ENST00000518743 568 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AC010476.1-201ENST00000519111 851 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AP000916.1-201ENST00000533869 835 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AP003717.3-201ENST00000544832 1180 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 UBE2NP1-201ENST00000545592 458 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 MIR4277-201ENST00000578298 84 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC005255.1-201ENST00000593748 216 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AP003117.1-201ENST00000602771 554 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM1O00151 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 OR2BH1P-201ENST00000608850 864 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AC006946.3-201ENST00000609791 756 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 VN1R9P-201ENST00000614184 867 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM1O00151 XIST_intron.1-201ENST00000619444 68 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 AC024595.1-201ENST00000623088 387 ntBASIC3.89□□□□□ -1.79
PDLIM1O00151 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
PDLIM1O00151 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM1O00151 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.89□□□□□ -1.79
PDLIM1O00151 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM1O00151 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 MFSD8-220ENST00000641243 1422 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PDLIM1O00151 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 SEC63P2-201ENST00000503863 1939 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 SNORA63.3-201ENST00000362682 132 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 RNA5SP509-201ENST00000364577 119 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 MIR124-3-201ENST00000384866 87 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AP002784.2-201ENST00000397300 549 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 MTATP6P31-201ENST00000406985 692 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 SNORA11F-201ENST00000408237 128 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AC016397.1-201ENST00000412463 242 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 BX664727.1-201ENST00000416024 466 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC114814.2-201ENST00000419195 485 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC092832.1-201ENST00000422934 400 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AC073310.1-201ENST00000423226 1033 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 RPS29P17-201ENST00000430795 166 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC008379.1-201ENST00000463655 464 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AC011276.1-201ENST00000469688 323 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 C1DP5-201ENST00000525775 383 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 HIGD1AP5-201ENST00000529959 259 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.88□□□□□ -1.79
PDLIM1O00151 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms