Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 SNORA70.14-201ENST00000516205 110 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC008802.1-201ENST00000519121 791 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC087369.1-201ENST00000520775 996 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 OR8R1P-201ENST00000543943 764 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 KATNBL1P5-201ENST00000605015 517 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL592436.1-201ENST00000605135 558 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL391834.1-201ENST00000609609 560 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AP004607.9-201ENST00000618202 316 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL356094.1-201ENST00000624663 1212 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC016717.3-201ENST00000624730 554 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 MFSD8-220ENST00000641243 1422 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNU6-213P-201ENST00000384051 104 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNU4-31P-201ENST00000384211 141 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MIR199A2-201ENST00000385289 110 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 TAF9BP2-201ENST00000400856 499 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 ZNF602P-201ENST00000405929 924 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNU6-628P-201ENST00000410675 107 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC010385.1-201ENST00000412374 256 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC073508.1-201ENST00000428866 656 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RANP8-201ENST00000444720 713 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MTND2P30-201ENST00000456663 382 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC005229.2-201ENST00000456995 399 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNU7-170P-201ENST00000459303 61 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RN7SKP60-201ENST00000516985 239 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 TOMM20P2-201ENST00000540082 421 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC120057.2-201ENST00000571520 271 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MIR4738-201ENST00000579134 87 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC022884.3-201ENST00000579571 248 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 VN1R79P-201ENST00000593540 513 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC005255.1-201ENST00000593748 216 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL606490.9-201ENST00000603331 271 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 ABI1P1-201ENST00000603375 1120 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL671309.1-201ENST00000603750 544 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MIR6500-201ENST00000622700 86 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC020923.1-201ENST00000624021 917 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC091905.1-201ENST00000624400 311 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AL139811.1-201ENST00000424779 2299 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 AC006504.1-201ENST00000562493 3666 ntBASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAPPC4Q9Y296 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 MIR372-201ENST00000362225 67 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 SNORA62.2-201ENST00000364672 152 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms