Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC136618.2-201ENST00000575091 400 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 MIR6798-201ENST00000612887 67 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 NLRP3P1-201ENST00000622303 1785 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC016583.1-201ENST00000624221 2431 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AC092070.2-203ENST00000598377 3644 ntBASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PDZRN3Q9UPQ7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RNA5SP46-201ENST00000362370 120 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-1159P-201ENST00000362933 107 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.180-201ENST00000363867 113 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RN7SKP128-201ENST00000364270 303 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RNU1-39P-201ENST00000383897 165 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RPL7P25-201ENST00000404151 721 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RPL26P37-201ENST00000411983 438 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 OR2AT2P-201ENST00000413438 905 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL096829.1-201ENST00000413677 457 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL137014.1-201ENST00000420490 1226 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RPS3AP38-201ENST00000435889 763 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL121871.1-201ENST00000443413 436 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC013470.1-201ENST00000453438 462 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC112184.1-201ENST00000505179 312 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 KCTD9P2-201ENST00000512203 1013 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RNA5SP401-201ENST00000515920 127 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 Y_RNA.680-201ENST00000516441 93 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL109766.1-201ENST00000555080 552 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RPL21P7-201ENST00000557463 483 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MTCO3P23-201ENST00000561363 289 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MIR3682-201ENST00000581338 84 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 MIR4505-201ENST00000582238 73 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC010525.2-201ENST00000590920 195 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 RNF138P2-201ENST00000603490 592 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC011626.1-201ENST00000604710 562 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AP006248.2-201ENST00000623309 592 ntBASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PDZRN3Q9UPQ7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
PDZRN3Q9UPQ7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC119674.1-202ENST00000641333 1860 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AL022323.4-201ENST00000623980 13120 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 MIR365B-201ENST00000362317 111 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 SNORA58B-201ENST00000364259 136 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RNA5SP240-201ENST00000365355 128 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RNU4-2-201ENST00000365668 141 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-575P-201ENST00000411326 105 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RPL23AP60-201ENST00000450011 454 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 AL590365.1-201ENST00000450788 243 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SL352P-201ENST00000466002 277 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SL269P-201ENST00000467795 305 ntBASIC7.58□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SL799P-201ENST00000475891 298 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms