Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 HSPD1P21-201ENST00000436541 245 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 RPL37P3-201ENST00000456825 293 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC104619.4-201ENST00000510773 249 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC112206.4-201ENST00000515142 405 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 IGKV2-36-201ENST00000519999 223 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AP005229.2-201ENST00000609980 697 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC068880.4-201ENST00000623082 495 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 Z95327.2-201ENST00000414579 1873 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AL118496.1-201ENST00000440201 1812 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 SEC63P2-201ENST00000503863 1939 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 RNA5SP296-201ENST00000410523 111 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AL591419.1-201ENST00000427423 339 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 RPL5P24-201ENST00000463742 885 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 RPS3AP6-201ENST00000484430 795 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC092902.1-201ENST00000486999 259 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 HSPD1P15-201ENST00000505573 1122 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC124068.1-201ENST00000563131 678 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC012254.4-201ENST00000588843 273 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 CR392039.4-201ENST00000624968 501 ntBASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SHROOM4Q9ULL8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM4Q9ULL8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM4Q9ULL8 AC083899.2-201ENST00000423285 1376 ntBASIC7.46□□□□□ -1.21
SHROOM4Q9ULL8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SHROOM4Q9ULL8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 RNU6-481P-201ENST00000384194 107 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 RPL12P46-201ENST00000436610 195 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AC006511.1-201ENST00000470614 315 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AC015908.1-201ENST00000478739 476 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 RN7SKP18-201ENST00000516005 275 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 OR8I1P-201ENST00000529291 931 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 AC018552.3-201ENST00000567416 561 ntBASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC7.46□□□□□ -1.22
SHROOM4Q9ULL8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 Z97055.1-201ENST00000419730 712 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 RPL12P18-201ENST00000437175 325 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC083863.1-201ENST00000438811 231 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 RPL7L1P1-201ENST00000448259 785 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 RAD23BP3-201ENST00000454157 1152 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 SMARCE1P4-201ENST00000523647 241 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 MIR3124-201ENST00000582636 67 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC020914.6-201ENST00000594327 272 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC123768.4-201ENST00000616244 701 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 STMN1P1-201ENST00000617809 440 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 AC017007.4-201ENST00000503353 1352 ntBASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHROOM4Q9ULL8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 SNORD3H-201ENST00000384486 214 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AL445183.3-201ENST00000414168 502 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 RPS20P1-201ENST00000434853 354 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 Z74696.2-201ENST00000436514 498 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC006994.1-201ENST00000438212 839 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 TPTE2P6-202ENST00000445572 1007 ntBASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.44□□□□□ -1.22
SHROOM4Q9ULL8 AC104108.1-201ENST00000509930 412 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms