Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RNF6P1-201ENST00000444889 1784 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RNU6-819P-201ENST00000364116 107 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RN7SKP280-201ENST00000364196 304 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC245054.1-201ENST00000420944 258 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 NDUFA5P10-201ENST00000432147 357 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RPL23AP62-201ENST00000463396 453 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RPS3AP50-201ENST00000487064 803 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC093267.1-201ENST00000489176 961 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 HMGB3P14-201ENST00000494195 599 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 MTCO1P30-201ENST00000515244 580 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 RNU2-58P-201ENST00000516403 183 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AP006245.1-201ENST00000522549 120 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC092851.1-201ENST00000535964 478 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 CYP2C60P-201ENST00000566088 139 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC007687.1-201ENST00000602704 304 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 ASNSP1-204ENST00000641977 1664 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 DCAF13P1-201ENST00000495256 1330 ntBASIC3.64□□□□□ -1.83
TREX1Q9NSU2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.64□□□□□ -1.83
TREX1Q9NSU2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AL138878.1-201ENST00000405131 347 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 RPL26P37-201ENST00000411983 438 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 OSTCP5-201ENST00000425293 453 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AL138799.3-201ENST00000438968 350 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC084357.1-201ENST00000473404 255 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC092451.1-201ENST00000480211 153 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 NPM1P41-201ENST00000512920 831 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 SNORA70.17-201ENST00000516449 133 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 RNU6-1308P-201ENST00000516817 103 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 LLPHP1-201ENST00000603571 367 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AP003117.2-201ENST00000606010 545 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 AC099676.1-201ENST00000608886 657 ntBASIC3.63□□□□□ -1.83
TREX1Q9NSU2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.63□□□□□ -1.83
TREX1Q9NSU2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RNU6-328P-201ENST00000390887 106 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC007066.1-201ENST00000392902 381 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RN7SKP263-201ENST00000411194 309 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms