Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC007342.7-201ENST00000624610 2337 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC010329.2-201ENST00000595195 2737 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC019155.1-201ENST00000382242 574 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-1320P-201ENST00000390838 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-1269P-201ENST00000391139 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 MTND6P18-201ENST00000439477 513 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AL133244.1-201ENST00000456007 258 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 snoU13.24-201ENST00000458998 104 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-599P-201ENST00000459383 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-1193P-201ENST00000459461 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC018797.3-201ENST00000513388 1241 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC010342.1-201ENST00000514047 877 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RFPL4AP3-201ENST00000515267 345 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 PDCL2P2-201ENST00000533651 189 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC009303.3-201ENST00000591103 736 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-368P-201ENST00000620928 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 RNU6-538P-201ENST00000622329 107 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 BMS1P21-201ENST00000634565 365 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.11□□□□□ -1.91
KIAA1549Q9HCM3 AC095050.2-201ENST00000510748 1458 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 Z99755.1-201ENST00000414048 380 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 SNRPFP2-201ENST00000440710 251 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 BTF3P5-201ENST00000457252 467 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC103843.2-201ENST00000530523 682 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 DUXAP6-201ENST00000553858 601 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 MIR4276-201ENST00000584832 70 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 BRDTP1-201ENST00000605735 677 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC018816.2-201ENST00000621460 353 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 AC016542.2-201ENST00000624201 619 ntBASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KIAA1549Q9HCM3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AL391417.1-201ENST00000404100 426 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC005019.1-201ENST00000436455 431 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 PPIAP17-201ENST00000438507 471 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC092641.1-201ENST00000440229 772 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 RPL21P13-201ENST00000488305 481 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 MIR5195-201ENST00000583555 115 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AL158062.1-201ENST00000619632 745 ntBASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
KIAA1549Q9HCM3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 MIR423-201ENST00000362201 94 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KIAA1549Q9HCM3 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms