Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AL357075.1-201ENST00000404107 726 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC021205.1-201ENST00000468797 348 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC108751.2-201ENST00000469993 231 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC108729.3-201ENST00000513484 108 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AL512310.1-201ENST00000548639 172 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 RPP40P2-201ENST00000603596 712 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 LSM1P2-201ENST00000604911 322 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 U8.2-201ENST00000363156 134 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 MIR518E-201ENST00000385252 88 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AL353678.1-201ENST00000422735 741 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 IGKV3-31-201ENST00000523109 329 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC245100.7-201ENST00000609678 442 ntBASIC3.23□□□□□ -1.89
CHD8Q9HCK8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD8Q9HCK8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 HMGB3P16-201ENST00000508037 287 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC008011.1-201ENST00000545989 227 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC062016.1-201ENST00000355719 319 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 SNORA5.1-201ENST00000384275 131 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AL590084.1-201ENST00000407885 387 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 VDAC1P9-201ENST00000412766 841 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 RPS27AP9-201ENST00000477681 438 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 AL354950.1-201ENST00000614150 568 ntBASIC3.22□□□□□ -1.89
CHD8Q9HCK8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHD8Q9HCK8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CHD8Q9HCK8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 SETP9-201ENST00000423837 832 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 PPBPP1-201ENST00000510807 373 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 TRAV37-201ENST00000553906 342 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC092868.3-201ENST00000560515 784 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC067852.3-201ENST00000589177 561 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 RNA5SP424-201ENST00000390988 115 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AL591623.2-201ENST00000449978 222 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC007599.1-201ENST00000568688 1174 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 MIR4498-201ENST00000577599 66 ntBASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.21□□□□□ -1.9
CHD8Q9HCK8 AC006946.3-201ENST00000609791 756 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms