Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL390862.1-201ENST00000635467 1469 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL445523.1-201ENST00000451184 1362 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RNU6-931P-201ENST00000363850 107 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 Y_RNA.201-201ENST00000364052 96 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RNA5SP505-201ENST00000364748 108 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RNU6-1200P-201ENST00000384162 107 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 FABP12P1-201ENST00000401911 322 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL021407.1-201ENST00000404531 386 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC019178.2-201ENST00000423595 505 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 C4BPAP2-201ENST00000428434 478 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 MTND1P20-201ENST00000430341 950 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC092013.1-201ENST00000438795 332 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ELOCP8-201ENST00000439309 332 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 MTCYBP34-201ENST00000439552 670 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ELOCP10-201ENST00000440624 327 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ELOCP15-201ENST00000442090 332 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 TPTE2P6-202ENST00000445572 1007 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC079168.2-201ENST00000453977 416 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC010326.1-201ENST00000462726 602 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 MTND4LP3-201ENST00000468320 276 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RN7SL385P-201ENST00000468873 276 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RPL23AP71-201ENST00000470966 469 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RPL23AP72-201ENST00000492447 435 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RN7SKP31-201ENST00000516354 278 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 IGKV2-36-201ENST00000519999 223 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 UBE2NP1-201ENST00000545592 458 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC004217.3-201ENST00000551552 878 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ISCA1P3-201ENST00000577104 373 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RN7SL690P-201ENST00000582087 240 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC008745.1-201ENST00000604064 271 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ELOCP34-201ENST00000604436 327 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AP003973.1-201ENST00000604639 691 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL163642.2-201ENST00000604722 1019 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC010200.2-201ENST00000605098 235 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL592221.1-201ENST00000605266 382 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC131235.4-201ENST00000609288 620 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.82□□□□□ -1.64
USP29Q9HBJ7 AL442639.1-201ENST00000625030 1899 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RNU6-839P-201ENST00000363347 108 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RNU4-24P-201ENST00000364565 139 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RNU6-621P-201ENST00000364752 109 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 BTF3L4P1-201ENST00000413813 468 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC099336.2-201ENST00000422457 254 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 Z74021.1-201ENST00000423610 407 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC073069.1-201ENST00000428657 441 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RPL7P4-203ENST00000430239 730 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC108463.1-201ENST00000450258 347 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC099560.2-201ENST00000457554 255 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 PNPLA4P1-201ENST00000458328 305 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RPL7AP28-201ENST00000464513 571 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 FTH1P2-201ENST00000466086 412 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms