Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC093875.1-201ENST00000623688 504 ntBASIC4.03□□□□□ -1.76
VIPAS39Q9H9C1 AC017104.5-201ENST00000637647 639 ntBASIC4.03□□□□□ -1.76
VIPAS39Q9H9C1 AC006927.2-201ENST00000639256 389 ntBASIC4.03□□□□□ -1.76
VIPAS39Q9H9C1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
VIPAS39Q9H9C1 ASNSP1-204ENST00000641977 1664 ntBASIC4.03□□□□□ -1.76
VIPAS39Q9H9C1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 MFSD8-216ENST00000641147 4009 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC109780.1-201ENST00000451768 1344 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 RNU5B-1-201ENST00000363286 116 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 RPL31P12-201ENST00000422587 358 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 SDR42E1P3-201ENST00000438345 502 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC073648.4-201ENST00000442655 781 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 OR51B8P-201ENST00000449892 769 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 RPL7P31-201ENST00000450192 724 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AL136097.1-201ENST00000456945 913 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 OR52A4P-201ENST00000472867 958 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC093801.2-201ENST00000503966 1050 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC084783.1-201ENST00000565846 910 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 BNIP3P4-201ENST00000604946 565 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC124016.2-201ENST00000610058 665 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AL121890.3-201ENST00000618494 516 ntBASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VIPAS39Q9H9C1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RAD17P1-201ENST00000418130 2042 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 SNORA51.8-201ENST00000384234 132 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 MIR620-201ENST00000385232 95 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RNU6-1000P-201ENST00000391066 106 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RPS26P8-201ENST00000393490 348 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 MCTS2P-201ENST00000394552 546 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 DNAJC19P6-201ENST00000401853 280 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 SNORA11C-201ENST00000408532 129 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC092638.1-201ENST00000411966 1275 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL354692.1-201ENST00000423044 315 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL138785.1-201ENST00000425821 331 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RPS7P2-201ENST00000435134 607 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 PHBP16-201ENST00000446318 950 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL929288.2-201ENST00000446368 407 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 MRPS31P2-201ENST00000451581 518 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 CEACAMP6-201ENST00000452007 574 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 HMGB3P21-201ENST00000452483 547 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 Z95152.1-201ENST00000453556 656 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC010468.1-201ENST00000461022 817 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RPL12P20-201ENST00000475538 479 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RPL35P6-201ENST00000490024 372 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 HMGB1P38-201ENST00000490557 577 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RPL30P11-201ENST00000495304 339 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 SUMO2P5-201ENST00000506790 245 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 OR5M14P-201ENST00000506803 618 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC008494.2-201ENST00000514544 370 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 RNA5SP49-201ENST00000516450 115 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC008562.1-201ENST00000521763 330 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 HMGB1P1-201ENST00000522557 636 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC019227.1-201ENST00000526902 510 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL442163.2-201ENST00000553912 710 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC010735.1-201ENST00000567305 1026 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC022146.1-201ENST00000595307 847 ntBASIC4.01□□□□□ -1.77
VIPAS39Q9H9C1 AC093765.1-201ENST00000603758 881 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms