Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL365217.1-201ENST00000398578 2436 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PKMP2-201ENST00000412159 1677 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PRG3-201ENST00000287143 869 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FO393411.1-201ENST00000325612 420 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-1216P-201ENST00000362590 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-873P-201ENST00000363833 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU4-33P-201ENST00000364316 85 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP192-201ENST00000364404 120 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.234-201ENST00000364409 97 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA71A-201ENST00000364729 134 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-384P-201ENST00000364900 104 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-98P-201ENST00000384173 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP377-201ENST00000390852 112 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP376-201ENST00000390949 112 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-159P-201ENST00000391080 106 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA26-201ENST00000391286 122 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RPS12P16-201ENST00000399739 407 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR1208-201ENST00000408334 73 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP107-201ENST00000411358 122 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC021016.1-201ENST00000414167 498 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL121748.1-201ENST00000414308 552 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL121916.1-201ENST00000429405 308 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CYP2C58P-201ENST00000436281 475 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RPL23AP74-201ENST00000437246 471 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PHBP16-201ENST00000446318 950 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PRDX2P4-201ENST00000447134 600 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL445991.1-201ENST00000450381 475 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC073135.1-201ENST00000451150 775 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL133351.3-201ENST00000454998 193 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC008677.2-201ENST00000460082 306 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC110994.1-201ENST00000468519 406 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RPS28P7-201ENST00000473748 210 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PFN1P9-201ENST00000475753 433 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL302P-201ENST00000475999 300 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC079080.1-201ENST00000479841 822 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL320P-201ENST00000484133 295 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL461P-201ENST00000484915 282 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC009120.1-201ENST00000493458 473 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC106872.7-201ENST00000508621 312 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC008453.1-201ENST00000511626 425 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TECRP1-201ENST00000513307 445 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-126P-201ENST00000516685 103 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-881P-201ENST00000516813 102 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 IGKV1D-22-201ENST00000518953 324 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SNRPCP17-201ENST00000520330 205 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC104027.1-201ENST00000521887 300 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC136443.2-201ENST00000528546 258 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TMEM262-206ENST00000530719 494 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC107918.3-201ENST00000533272 382 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC027369.4-201ENST00000534243 816 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LRRC37A13P-201ENST00000546055 287 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL079307.2-201ENST00000557308 448 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC022523.2-201ENST00000561045 150 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC136619.1-201ENST00000564015 258 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 STX1B-202ENST00000565419 834 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DNM1P32-201ENST00000566124 544 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms