Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCAPERQ9BY12 LINC01355-201ENST00000566551 5444 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 MIR422A-201ENST00000362286 90 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 RPS20P1-201ENST00000434853 354 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 AC008481.1-201ENST00000463278 396 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 CCDC75P1-201ENST00000469247 791 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 AC109925.1-201ENST00000478069 331 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 AC092868.3-201ENST00000560515 784 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 HMGB1P50-201ENST00000605814 607 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 LINC02471-203ENST00000641941 4752 ntBASIC5.17□□□□□ -1.58
SCAPERQ9BY12 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCAPERQ9BY12 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 RNA5SP322-201ENST00000363617 119 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 RNU1-140P-201ENST00000365040 165 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AL603766.1-201ENST00000407763 664 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AL160175.1-201ENST00000428124 247 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 HMGB1P16-201ENST00000447155 540 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 RPS27AP1-201ENST00000475545 471 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 PRELID3BP6-201ENST00000503839 571 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AC093732.2-201ENST00000607950 274 ntBASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.16□□□□□ -1.58
SCAPERQ9BY12 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 RNU6-301P-201ENST00000384277 107 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 RSL24D1P1-201ENST00000404972 493 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 ZNF603P-201ENST00000405613 487 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AL353678.1-201ENST00000422735 741 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 RPL7P48-201ENST00000461513 746 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AC073657.2-201ENST00000605661 303 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 AL732372.2-225ENST00000642124 456 ntBASIC5.15□□□□□ -1.58
SCAPERQ9BY12 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SCAPERQ9BY12 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCAPERQ9BY12 FAM35DP-201ENST00000323387 2712 ntBASIC5.15□□□□□ -1.59
SCAPERQ9BY12 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC118465.1-201ENST00000513820 1271 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 MIR7106-201ENST00000612419 65 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 ATP5A1P2-202ENST00000616464 443 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 HSPA8P17-201ENST00000427029 1382 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC092111.2-201ENST00000611627 1414 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 RNA5SP126-201ENST00000365092 109 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 RPL21P109-201ENST00000422213 475 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 IGLVIV-53-201ENST00000520107 367 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 AC018442.3-201ENST00000523025 183 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 EIF1P6-201ENST00000600054 334 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 RPL12P50-201ENST00000603116 116 ntBASIC5.14□□□□□ -1.59
SCAPERQ9BY12 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCAPERQ9BY12 TNPO1P3-201ENST00000436471 2662 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 MAPK10-373ENST00000641983 6772 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 NEAT1-202ENST00000501122 22743 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.13□□□□□ -1.59
SCAPERQ9BY12 NMD3P1-201ENST00000439704 1488 ntBASIC5.13□□□□□ -1.59
SCAPERQ9BY12 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms