Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 RNU6-715P-201ENST00000365204 103 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC074375.1-201ENST00000372993 192 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 Y_RNA.577-201ENST00000384794 101 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 RNU6-1156P-201ENST00000410365 100 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 RN7SKP137-201ENST00000411074 307 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL355862.1-201ENST00000412705 353 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 RPL7P2-201ENST00000427639 268 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL389925.1-201ENST00000432257 728 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL645568.3-201ENST00000433683 316 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 FCF1P4-201ENST00000448326 183 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC094085.1-201ENST00000468914 584 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC026254.2-201ENST00000475295 371 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 PPP1R11P1-201ENST00000486095 376 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 RN7SL153P-201ENST00000486501 292 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 COX7A2P2-201ENST00000505291 250 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 RNU6-397P-201ENST00000516226 104 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC090517.1-201ENST00000569307 266 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC139493.1-201ENST00000604368 397 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AP001554.1-201ENST00000604533 376 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL136139.1-201ENST00000605568 222 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC091768.1-201ENST00000609258 930 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL359547.2-201ENST00000615810 418 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC130454.1-201ENST00000622948 401 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AL445250.1-203ENST00000641829 1535 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC011008.2-201ENST00000624866 3352 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 PWAR1-201ENST00000624188 2414 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AL121886.1-201ENST00000358609 435 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RNU6-212P-201ENST00000362642 104 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RN7SKP162-201ENST00000363605 345 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RNA5SP198-201ENST00000410376 127 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RN7SKP159-201ENST00000410657 292 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AL360081.1-201ENST00000428299 555 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 EZH2P1-201ENST00000431167 291 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC239800.1-201ENST00000442049 719 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 CFL1P4-201ENST00000451536 498 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 RPS27AP1-201ENST00000475545 471 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC084198.1-201ENST00000477747 402 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RPL21P6-201ENST00000479171 504 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RNU6-897P-201ENST00000517135 105 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC022868.1-201ENST00000517767 391 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AP003733.2-201ENST00000529409 171 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC006600.1-201ENST00000572529 153 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC005070.2-201ENST00000604391 260 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC103564.3-201ENST00000621194 220 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 uc_338.21-201ENST00000622458 147 ntBASIC6.44□□□□□ -1.38
USB1Q9BQ65 AC012629.3-201ENST00000623397 328 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms