Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AC107982.3-201ENST00000584957 985 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AC005242.1-201ENST00000585658 438 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AC069304.3-201ENST00000603938 1084 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 KATNBL1P1-201ENST00000605192 748 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AL451086.1-201ENST00000605596 223 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 U6.48-201ENST00000618523 106 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 AL162233.1-201ENST00000620014 944 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.99□□□□□ -1.77
RPRD1AQ96P16 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.99□□□□□ -1.77
RPRD1AQ96P16 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 HSPA8P1-201ENST00000425843 1833 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 MAPK10-373ENST00000641983 6772 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 RNA5SP306-201ENST00000411087 107 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 PTP4A1P5-201ENST00000420305 455 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL031736.2-201ENST00000426573 787 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 TPTE2P6-202ENST00000445572 1007 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 RPS17P13-201ENST00000448974 407 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 MTATP6P22-201ENST00000507369 598 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 RN7SKP141-201ENST00000516167 338 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 SNORA31.13-201ENST00000516624 135 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 PCNAP1-202ENST00000595299 752 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL109618.2-201ENST00000605527 211 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AC025016.1-201ENST00000616746 682 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 USP8P1-201ENST00000494673 3183 ntBASIC3.98□□□□□ -1.77
RPRD1AQ96P16 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPRD1AQ96P16 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 IPO8P1-201ENST00000455509 3109 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 OR5T3-201ENST00000303059 1023 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 OR4A15-201ENST00000314706 1035 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 RNU6-98P-201ENST00000384173 107 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 MIR199A2-201ENST00000385289 110 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AL590290.1-201ENST00000405336 380 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 RN7SKP202-201ENST00000410439 330 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 JKAMPP1-201ENST00000413804 919 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC004022.2-201ENST00000413824 193 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 LINC01347-201ENST00000417964 355 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 MTND4LP14-201ENST00000429447 288 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC011742.1-201ENST00000431448 434 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 Z74696.2-201ENST00000436514 498 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AP000873.1-201ENST00000463987 400 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC005344.1-201ENST00000613391 459 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AL161637.1-201ENST00000622380 412 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC024023.1-201ENST00000624530 922 ntBASIC3.97□□□□□ -1.77
RPRD1AQ96P16 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
RPRD1AQ96P16 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms