Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTN4IP1Q8WWV3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RNA5SP283-201ENST00000365604 119 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 PPIAP31-201ENST00000405422 495 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 ZNF602P-201ENST00000405929 924 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC010385.1-201ENST00000412374 256 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RPS12P23-201ENST00000419579 400 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC004975.1-201ENST00000428733 208 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC006480.1-201ENST00000449887 378 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 CYCSP53-201ENST00000455540 265 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC004801.2-202ENST00000463559 283 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC107398.1-201ENST00000486904 505 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RPL23AP73-201ENST00000492507 471 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC010460.1-201ENST00000507087 466 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC026784.1-201ENST00000507986 352 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC108157.1-201ENST00000510511 539 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RAC1P2-201ENST00000511164 579 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RNA5SP164-201ENST00000516533 110 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 OR5AP1P-201ENST00000529730 940 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 OR4C2P-201ENST00000530855 1064 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC007224.1-201ENST00000564410 144 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC005255.1-201ENST00000593748 216 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 ABI1P1-201ENST00000603375 1120 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC123768.4-201ENST00000616244 701 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 MIR6810-201ENST00000622701 70 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 C2orf27A-204ENST00000623058 969 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 AC119674.1-212ENST00000641155 993 ntBASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN4IP1Q8WWV3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MAPK10-372ENST00000641954 3413 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 RN7SKP227-201ENST00000364445 330 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 U3.15-201ENST00000365398 212 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 RNU6-213P-201ENST00000384051 104 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MIR184-201ENST00000384962 84 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 RN7SKP285-201ENST00000410137 318 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 TCEA1P2-201ENST00000420496 906 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 RPL30P3-201ENST00000424262 333 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MTND4LP14-201ENST00000429447 288 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 SNORA71B-202ENST00000439232 272 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 NUTF2P7-201ENST00000453086 375 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC099563.1-201ENST00000456086 418 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 OR9M1P-201ENST00000459641 921 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC006511.1-201ENST00000470614 315 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC007537.2-201ENST00000472093 511 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC087385.1-201ENST00000475062 312 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 SUMO1P1-201ENST00000497904 306 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC092593.2-201ENST00000513866 913 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 OR8R1P-201ENST00000543943 764 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 SNRPGP1-201ENST00000553864 222 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL161713.1-201ENST00000555538 145 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL731537.2-201ENST00000561565 951 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC006960.3-201ENST00000561845 705 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MIR4425-201ENST00000580572 84 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MIR4286-201ENST00000580651 93 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 MIR4697-201ENST00000582977 78 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AC115621.1-201ENST00000604653 858 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL163642.2-201ENST00000604722 1019 ntBASIC3.11□□□□□ -1.91
RTN4IP1Q8WWV3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms