Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC008079.2-201ENST00000623543 20396 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 VDAC2P1-201ENST00000399358 958 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DSTNP4-201ENST00000399472 474 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 CTSL3P-202ENST00000412179 788 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AL121878.1-201ENST00000418638 859 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 MFSD13B-201ENST00000420133 1290 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 RPL21P126-201ENST00000470049 478 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC010683.1-201ENST00000473673 378 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AP000893.1-201ENST00000474462 794 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 NIP7P2-201ENST00000485801 544 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AL049874.2-201ENST00000492636 288 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 MTCO1P30-201ENST00000515244 580 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 RN7SKP21-201ENST00000516503 220 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 ELOCP32-201ENST00000548625 324 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AL109766.1-201ENST00000555080 552 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 MIR4716-201ENST00000579628 84 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AL359535.1-201ENST00000612100 1087 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AC009039.2-201ENST00000624524 529 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 AL450326.2-201ENST00000421913 1962 ntBASIC4.7□□□□□ -1.66
HMGB4Q8WW32 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB4Q8WW32 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AP000526.1-201ENST00000603308 1388 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 RNU4-40P-201ENST00000364351 143 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SNORD116-2-201ENST00000384274 95 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SNORD116-6-201ENST00000384711 96 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SNORA68.2-201ENST00000391263 128 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 RNU4-72P-201ENST00000410754 173 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 RPL7AP25-201ENST00000423357 805 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL593851.1-201ENST00000426171 157 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL158073.1-201ENST00000426848 1104 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 TXNL1P1-201ENST00000429528 554 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL365396.1-201ENST00000430854 671 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 UBE2D3P1-201ENST00000436669 444 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 MTCYBP34-201ENST00000439552 670 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC108463.1-201ENST00000450258 347 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 MTND6P6-201ENST00000478031 263 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC010486.3-201ENST00000511602 785 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC026402.1-201ENST00000513642 170 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 NPM1P6-201ENST00000521088 871 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AP000790.1-201ENST00000528891 737 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms