Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RNU6-31P-201ENST00000384388 108 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RPS26P8-201ENST00000393490 348 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AL590290.1-201ENST00000405336 380 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 MTND2P16-201ENST00000419987 799 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 C4BPAP2-201ENST00000428434 478 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC098824.1-201ENST00000453565 980 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 DNAJC19P1-201ENST00000455312 319 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 HPRT1P1-201ENST00000509498 657 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 SUMO2P20-201ENST00000520803 283 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 Z82195.1-201ENST00000604558 398 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AP004372.1-201ENST00000604842 844 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 MIR6716-201ENST00000613413 80 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC112484.5-201ENST00000624189 228 ntBASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP97-201ENST00000365006 84 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 MIR199A2-201ENST00000385289 110 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 DNAJC19P6-201ENST00000401853 280 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP317-201ENST00000410176 116 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP311-201ENST00000411290 116 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 COX6CP17-201ENST00000421389 185 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AL049610.1-201ENST00000423374 372 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 YY1P1-201ENST00000427625 668 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RPS27AP12-201ENST00000429552 465 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 NEK4P1-201ENST00000433383 879 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC006994.1-201ENST00000438212 839 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC006326.1-201ENST00000445465 787 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 OR7L1P-201ENST00000456181 380 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RPS7P7-201ENST00000463499 571 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RPS23P7-201ENST00000466210 444 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RPL31P13-201ENST00000484151 370 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RPS3AP6-201ENST00000484430 795 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AC005351.1-201ENST00000511152 786 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP315-201ENST00000516340 116 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RNU6-352P-201ENST00000516908 107 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP312-201ENST00000517068 116 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AL049874.4-201ENST00000557593 255 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.63□□□□□ -1.83
CLHC1Q8NHS4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 CR381670.1-201ENST00000624291 1693 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 ASNSP1-204ENST00000641977 1664 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 MIR607-201ENST00000385241 96 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 RPL31P2-201ENST00000413849 377 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC234782.4-201ENST00000417646 1048 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AC241520.1-201ENST00000422654 1099 ntBASIC3.62□□□□□ -1.83
CLHC1Q8NHS4 AJ239321.1-201ENST00000424255 564 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms