Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK2A3Q8NEV1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK2A3Q8NEV1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 OR4A15-201ENST00000314706 1035 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RN7SKP115-201ENST00000363177 317 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RNU6-657P-201ENST00000383904 107 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RNU6-921P-201ENST00000384361 107 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 SNORD96B-201ENST00000386148 79 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR708-201ENST00000390708 88 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AL080315.1-201ENST00000406055 466 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR1178-201ENST00000408396 91 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 P2RY10P2-201ENST00000416730 913 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AL593851.1-201ENST00000426171 157 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RPL31P54-201ENST00000429803 370 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC008072.1-201ENST00000434254 824 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 YWHAZP7-201ENST00000436906 631 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MTCYBP34-201ENST00000439552 670 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AURKAPS2-201ENST00000454983 333 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 snoU13.20-201ENST00000459180 104 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 snoU13.7-201ENST00000459220 104 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC074386.1-201ENST00000476560 767 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RNY4P37-201ENST00000516225 96 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 RNA5SP392-201ENST00000516905 112 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 CYCSP28-201ENST00000534284 321 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC008033.2-201ENST00000542626 177 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR4458-201ENST00000578872 75 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR5699-201ENST00000578903 90 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 COX6CP4-201ENST00000605798 228 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AP000894.4-201ENST00000610185 483 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 FAM27B-201ENST00000610601 213 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 MIR6864-201ENST00000617935 70 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC068870.2-201ENST00000620635 389 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AL359757.1-201ENST00000623176 255 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AP000843.1-201ENST00000624880 701 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC103706.2-201ENST00000638080 240 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AL133243.3-201ENST00000617415 3004 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 AC012321.1-201ENST00000561622 1588 ntBASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK2A3Q8NEV1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 RNA5SP123-201ENST00000363244 119 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 SNORD116-2-201ENST00000384274 95 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 RNU6-441P-201ENST00000384545 106 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 SNORD116-6-201ENST00000384711 96 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 U3.30-201ENST00000391308 210 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AL450338.1-201ENST00000407987 512 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 RNU4-72P-201ENST00000410754 173 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 USP9YP26-201ENST00000421008 661 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC004074.1-201ENST00000421810 1063 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 BX510359.3-201ENST00000422168 306 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 RPL30P3-201ENST00000424262 333 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC234779.1-201ENST00000425910 285 ntBASIC4.09□□□□□ -1.75
CSNK2A3Q8NEV1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms