Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC112198.2-201ENST00000426589 6996 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 RPL31P54-201ENST00000429803 370 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 MTND1P20-201ENST00000430341 950 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AL590103.1-201ENST00000434488 307 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 MTCO2P16-201ENST00000436962 677 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 NOP56P2-201ENST00000447491 769 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 FTH1P25-201ENST00000447665 469 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 RPL7P59-201ENST00000447700 943 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 MTCYBP37-201ENST00000510642 1133 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 RNA5SP392-201ENST00000516905 112 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AP001207.1-201ENST00000524051 481 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC004217.3-201ENST00000551552 878 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC007954.1-201ENST00000554198 494 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC006272.2-201ENST00000594725 163 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AF131215.7-201ENST00000602443 707 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC115286.1-201ENST00000604298 434 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AL591034.3-201ENST00000605511 685 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC012409.3-201ENST00000611343 981 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC005332.6-201ENST00000613178 446 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 AC074140.1-201ENST00000621617 208 ntBASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.78□□□□□ -1.48
SMC1BQ8NDV3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
SMC1BQ8NDV3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC007529.1-201ENST00000418574 2178 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 RPL23AP47-201ENST00000408017 460 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 RPS15AP38-201ENST00000413110 372 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC011933.1-201ENST00000413334 321 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AL356387.2-201ENST00000422272 243 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SKP1P3-201ENST00000429280 487 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SEPT7P3-201ENST00000455017 621 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC005229.2-201ENST00000456995 399 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC116533.1-201ENST00000459748 321 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC010307.1-201ENST00000467206 836 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC105137.1-201ENST00000484355 562 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC080014.1-201ENST00000496877 1201 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 RPS24P16-201ENST00000497294 392 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 RNU6-513P-201ENST00000516104 104 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC073091.2-201ENST00000603205 907 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AP000811.1-201ENST00000603803 651 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC011626.1-201ENST00000604710 562 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC090116.1-201ENST00000615679 446 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC234782.5-201ENST00000617723 324 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC008443.7-201ENST00000622195 246 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC091953.5-201ENST00000622919 233 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC073348.1-201ENST00000623002 331 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 MIR492-201ENST00000638676 116 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 CR381670.1-201ENST00000624291 1693 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 AC079097.1-201ENST00000512187 1399 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 SALL4P2-201ENST00000423288 2910 ntBASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMC1BQ8NDV3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.76□□□□□ -1.49
SMC1BQ8NDV3 AC011477.1-204ENST00000623416 1325 ntBASIC5.76□□□□□ -1.49
SMC1BQ8NDV3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SMC1BQ8NDV3 AC097461.1-201ENST00000568928 2821 ntBASIC5.76□□□□□ -1.49
SMC1BQ8NDV3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms