Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AP003117.1-201ENST00000602771 554 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AC114878.2-201ENST00000604863 1251 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AL451044.1-201ENST00000604867 238 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AP003392.5-201ENST00000607857 415 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AC006946.3-201ENST00000609791 756 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AC020978.9-201ENST00000624380 1141 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AC090506.2-201ENST00000624521 419 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AP003072.4-201ENST00000624580 310 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 ATE1-AS1-202ENST00000636460 506 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 AL353743.4-201ENST00000422653 1547 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 PRO1804-201ENST00000623780 2050 ntBASIC3.58□□□□□ -1.84
SKA3Q8IX90 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA3Q8IX90 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 SNORA70C-201ENST00000384538 135 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 ENSAP1-201ENST00000392855 326 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 RPS26P8-201ENST00000393490 348 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 HSPE1P12-201ENST00000412576 301 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC017083.1-201ENST00000428093 483 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 AL356276.2-201ENST00000435919 558 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 RPL6P5-201ENST00000445678 828 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 RPL7P19-201ENST00000469948 618 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC007537.2-201ENST00000472093 511 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC015908.1-201ENST00000478739 476 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 FTH1P9-201ENST00000513251 355 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 IGKV2-38-201ENST00000517443 247 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 MTND1P6-201ENST00000523621 946 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 C1DP5-201ENST00000525775 383 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC007599.1-201ENST00000568688 1174 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC025627.2-201ENST00000576220 160 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 MIR4458-201ENST00000578872 75 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 MIR5684-201ENST00000585074 65 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AL021368.2-201ENST00000606125 5352 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 VN1R9P-201ENST00000614184 867 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC123768.4-201ENST00000616244 701 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 STMN1P1-201ENST00000617809 440 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC073569.3-201ENST00000619055 682 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 AC006249.1-201ENST00000621223 471 ntBASIC3.57□□□□□ -1.84
SKA3Q8IX90 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA3Q8IX90 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA3Q8IX90 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 SNORA60-201ENST00000362396 134 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 RNU6-543P-201ENST00000362576 108 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 SNORA63.3-201ENST00000362682 132 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 RNA5SP130-201ENST00000364431 114 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 AL022722.2-201ENST00000402519 180 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 SNORA3C-201ENST00000408792 125 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 RNU2-6P-201ENST00000411404 190 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 AC009237.5-201ENST00000414271 501 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 AC234782.4-201ENST00000417646 1048 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA3Q8IX90 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 AC093422.3-201ENST00000428506 305 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 AL512637.2-201ENST00000431287 1256 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.56□□□□□ -1.84
SKA3Q8IX90 ATP5HP2-201ENST00000433885 485 ntBASIC3.56□□□□□ -1.84
SKA3Q8IX90 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms