Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.95□□□□□ -1.3
SCUBE3Q8IX30 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCUBE3Q8IX30 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCUBE3Q8IX30 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RNU6-28P-201ENST00000362378 107 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RNU6-562P-201ENST00000362731 107 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RNU2-38P-201ENST00000410856 79 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC008280.1-201ENST00000418851 412 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 UBBP5-201ENST00000446970 266 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 EEF1B2P3-201ENST00000447718 678 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RPL23AP15-201ENST00000450202 459 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 MTND4LP30-201ENST00000454092 297 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AP000893.1-201ENST00000474462 794 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 OR5D17P-201ENST00000531492 978 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 HMGB3P26-201ENST00000560051 582 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AL445647.2-201ENST00000615170 130 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 FTX_2.1-201ENST00000618816 94 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AC103858.2-201ENST00000621471 543 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 MIR6823-201ENST00000622118 61 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 AL606534.2-204ENST00000635008 178 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RAD17P2-201ENST00000451754 1977 ntBASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.94□□□□□ -1.3
SCUBE3Q8IX30 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC245100.2-201ENST00000454544 1679 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL021877.2-201ENST00000624442 10684 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.106-201ENST00000363189 100 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL133260.1-201ENST00000405720 405 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL133384.1-201ENST00000412744 351 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 E2F6P2-201ENST00000420708 748 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 NMD3P2-201ENST00000421815 761 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC236972.1-201ENST00000433225 199 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL162388.1-201ENST00000450912 352 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC005008.1-201ENST00000456151 612 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC112492.4-201ENST00000456549 352 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 PRELID3BP1-201ENST00000457142 540 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC114801.2-201ENST00000503825 781 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC022493.2-201ENST00000506122 481 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC083906.1-201ENST00000509298 406 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 HIGD1AP13-201ENST00000509878 289 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 RNU4-77P-201ENST00000516692 156 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.700-201ENST00000516806 100 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC078899.1-201ENST00000521432 1185 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 SETP2-201ENST00000553886 926 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC012175.1-201ENST00000603755 531 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 Z98751.3-201ENST00000604447 521 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC114477.1-201ENST00000605097 605 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 SNORD58B-201ENST00000607313 66 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AC133644.2-201ENST00000608142 540 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 U6.104-201ENST00000637979 90 ntBASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms