Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 KPNA2P2-201ENST00000419546 1489 ntBASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD2Q8IV50 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC114546.3-201ENST00000623582 1734 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RBPJP5-201ENST00000449433 1447 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RNU1-134P-201ENST00000362935 165 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RNU6-730P-201ENST00000383954 104 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 Y_RNA.450-201ENST00000384198 113 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 Y_RNA.453-201ENST00000384223 109 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC013442.1-201ENST00000397347 228 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL356421.1-201ENST00000403255 413 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL7P25-201ENST00000404151 721 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 BTBD10P2-201ENST00000404779 676 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RAP1BP3-201ENST00000407180 549 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RNU4-55P-201ENST00000410731 137 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL31P2-201ENST00000413849 377 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL35AP3-201ENST00000414680 288 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL590233.1-201ENST00000430017 456 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL12P46-201ENST00000436610 195 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 MTCO3P18-201ENST00000440206 761 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 CNOT7P2-201ENST00000441051 832 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC092601.1-201ENST00000444526 383 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL445466.1-201ENST00000448432 357 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 TCEA1P1-201ENST00000449716 880 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL31P11-202ENST00000454082 372 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 TREML3P-201ENST00000457327 501 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPL15P21-201ENST00000495592 567 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC093824.1-201ENST00000508796 343 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SAP18P1-201ENST00000512058 390 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC093677.1-201ENST00000514414 678 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SNORA74.1-201ENST00000516320 180 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SETP2-201ENST00000553886 926 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC006504.3-201ENST00000586818 523 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 HMGN1P30-201ENST00000589286 268 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SUGT1P3-202ENST00000604259 383 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC121334.2-201ENST00000605387 271 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL390877.1-201ENST00000605704 214 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC023206.1-201ENST00000605824 298 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RPSAP75-201ENST00000605848 301 ntBASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.84□□□□□ -1.63
LYSMD2Q8IV50 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LYSMD2Q8IV50 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
LYSMD2Q8IV50 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LYSMD2Q8IV50 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LYSMD2Q8IV50 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 AC008033.1-201ENST00000216407 1162 ntBASIC4.83□□□□□ -1.64
LYSMD2Q8IV50 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms