Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC010401.2-201ENST00000575137 4934 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 U3.12-201ENST00000364498 214 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 RSL24D1P4-201ENST00000400938 484 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC067852.4-201ENST00000590314 478 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC006557.5-201ENST00000603126 811 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 MIR7154-201ENST00000620673 73 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC241585.2-209ENST00000638217 143 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 ZNF826P-207ENST00000622273 1910 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 NUP35P1-201ENST00000422734 947 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 CBX1P4-201ENST00000439415 457 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 OR51C1P-201ENST00000608504 942 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC021755.1-201ENST00000559747 1447 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AL121839.2-201ENST00000565058 6943 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 RPS24P12-201ENST00000402084 394 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 MYL8P-204ENST00000431574 518 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 NDUFB9P3-201ENST00000521269 501 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
CSMD3Q7Z407 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CSMD3Q7Z407 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AL138885.1-201ENST00000405921 675 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 USP9YP2-201ENST00000504503 1000 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 USP9YP1-201ENST00000513521 1002 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC026801.2-201ENST00000515352 425 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AL133477.1-201ENST00000457472 514 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 RPS17P11-201ENST00000474297 293 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 TRBV12-1-201ENST00000479785 344 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC008638.3-201ENST00000603341 463 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AP003485.2-201ENST00000623636 610 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 MAPK10-362ENST00000641864 4484 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC140076.1-201ENST00000449897 361 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 OR4C2P-201ENST00000530855 1064 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 CYCSP39-201ENST00000565821 309 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC118273.1-201ENST00000525324 3006 ntBASIC2.29□□□□□ -2.04
CSMD3Q7Z407 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 SNORA7.4-201ENST00000384249 137 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AL353692.2-201ENST00000407054 335 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 EIF4EP1-201ENST00000422311 642 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 RNU4-29P-201ENST00000515943 174 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC093524.1-201ENST00000564266 1094 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC018692.3-201ENST00000623929 123 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC018529.3-201ENST00000624212 2254 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 GSTM3P2-201ENST00000412746 530 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC233981.1-201ENST00000423224 461 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 Z93242.1-201ENST00000427102 353 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms