Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 U1.1-201ENST00000384101 164 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 PTMAP2-201ENST00000397627 327 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MIR1183-201ENST00000408856 89 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MTCO1P57-201ENST00000432182 261 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 NANOGP10-201ENST00000453325 895 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC025554.1-201ENST00000505641 188 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC090071.1-201ENST00000507713 644 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 RNU6-889P-201ENST00000517189 103 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 HMGB1P46-201ENST00000520062 610 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC015726.1-201ENST00000602353 681 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 MTCO3P22-201ENST00000603219 784 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL392048.1-201ENST00000613946 534 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 OR8B1P-202ENST00000641132 1178 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AC007342.9-201ENST00000623877 1385 ntBASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3F3CQ6NXT2 AL049737.1-201ENST00000413920 1403 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 MIR423-201ENST00000362201 94 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RNU6-356P-201ENST00000384140 107 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 ATP5F1P3-201ENST00000397213 657 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RPL7AP73-201ENST00000413490 353 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL691447.1-201ENST00000419456 387 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC018644.1-201ENST00000429934 551 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL365396.1-201ENST00000430854 671 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL445584.1-201ENST00000431451 330 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 TPTE2P1-204ENST00000435256 593 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AL133547.1-201ENST00000448546 220 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 TVP23BP2-201ENST00000455082 615 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CYCSP53-201ENST00000455540 265 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RPL9P32-201ENST00000464118 620 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 PPIAP15-201ENST00000479662 484 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 OR52A4P-203ENST00000498233 1014 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC109458.1-201ENST00000508858 316 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 PTGES3P3-201ENST00000511479 482 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RNU6-551P-201ENST00000516661 103 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 RNU6-352P-201ENST00000516908 107 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 PAICSP4-201ENST00000517543 1253 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 NARSP2-201ENST00000518524 679 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC091515.1-201ENST00000548110 679 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AF001550.2-201ENST00000636643 217 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC012442.3-202ENST00000636742 206 ntBASIC3.61□□□□□ -1.83
H3F3CQ6NXT2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms