Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
FOXF1Q12946 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
FOXF1Q12946 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC123912.3-201ENST00000600907 1367 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF1Q12946 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FOXF1Q12946 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AL136116.1-201ENST00000403591 381 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC068533.1-201ENST00000418542 415 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AC069157.1-201ENST00000421749 137 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AL035458.1-201ENST00000433096 585 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 PPIAP3-201ENST00000450588 505 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL136097.1-201ENST00000456945 913 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AC091564.1-201ENST00000464563 479 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AP002812.1-201ENST00000495378 474 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXF1Q12946 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC026333.2-201ENST00000542164 106 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 MIR3186-201ENST00000577404 85 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 BMS1P7-201ENST00000602440 1052 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 SNORA51-201ENST00000606420 132 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL137246.1-201ENST00000607072 977 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF1Q12946 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 AL357559.1-201ENST00000622228 274 ntBASIC3.16□□□□□ -1.9
FOXF1Q12946 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF1Q12946 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF1Q12946 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF1Q12946 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
FOXF1Q12946 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXF1Q12946 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.15□□□□□ -1.9
FOXF1Q12946 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.15□□□□□ -1.9
FOXF1Q12946 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.15□□□□□ -1.9
FOXF1Q12946 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.15□□□□□ -1.9
FOXF1Q12946 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXF1Q12946 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 RNU6-697P-201ENST00000363348 107 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FOXF1Q12946 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AL136131.1-201ENST00000406079 803 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AL121578.1-201ENST00000428051 892 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 BTG3P1-201ENST00000435859 716 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AC092641.1-201ENST00000440229 772 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AC243772.1-201ENST00000451620 410 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF1Q12946 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF1Q12946 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 RN7SKP157-201ENST00000516174 282 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF1Q12946 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 OR8X1P-201ENST00000534542 869 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXF1Q12946 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
FOXF1Q12946 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
FOXF1Q12946 FAM106CP-201ENST00000582212 507 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF1Q12946 AL365503.1-201ENST00000605247 905 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 AL592295.2-201ENST00000612578 206 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 AL392088.2-201ENST00000637607 285 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF1Q12946 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
FOXF1Q12946 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF1Q12946 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF1Q12946 MFSD8-233ENST00000641482 4860 ntBASIC3.15□□□□□ -1.91
FOXF1Q12946 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF1Q12946 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXF1Q12946 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms