Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.84□□□□□ -1.96
HIST1H1AQ02539 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 MTND5P27-201ENST00000428871 1720 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNU6-805P-201ENST00000365643 106 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 SNORA56-201ENST00000383966 129 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 ZNF602P-201ENST00000405929 924 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNA5SP317-201ENST00000410176 116 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNU6-628P-201ENST00000410675 107 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNA5SP311-201ENST00000411290 116 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 TRIAP1P1-201ENST00000427062 225 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC006989.1-201ENST00000427212 131 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 YY1P1-201ENST00000427625 668 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 C4BPAP2-201ENST00000428434 478 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 Z74696.2-201ENST00000436514 498 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 SNORA71B-202ENST00000439232 272 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 MRPS31P2-201ENST00000451581 518 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC021205.1-201ENST00000468797 348 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC006511.1-201ENST00000470614 315 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RAC1P2-201ENST00000511164 579 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNA5SP315-201ENST00000516340 116 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RNA5SP312-201ENST00000517068 116 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RN7SKP289-201ENST00000517244 295 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 NDUFB9P3-201ENST00000521269 501 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC008489.1-201ENST00000524271 483 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC011602.1-201ENST00000546484 331 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC010198.2-201ENST00000550612 259 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 TGIF1P1-201ENST00000558095 802 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC010735.1-201ENST00000567305 1026 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 NF1P5-201ENST00000588287 448 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AC011468.4-201ENST00000603942 409 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AL163642.2-201ENST00000604722 1019 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 AL592494.3-201ENST00000609485 464 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 NMD3P1-201ENST00000439704 1488 ntBASIC2.83□□□□□ -1.96
HIST1H1AQ02539 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HIST1H1AQ02539 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 FAM91A3P-201ENST00000456826 2544 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 SNORA73.2-201ENST00000364946 201 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 XKRYP4-201ENST00000414395 483 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 MOB1AP1-201ENST00000430903 535 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 SETD6P1-201ENST00000444575 317 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 XKRYP5-201ENST00000449659 483 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC010401.1-201ENST00000463867 348 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AP001636.2-201ENST00000525517 696 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC006518.1-201ENST00000541449 943 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AL121766.1-201ENST00000547436 487 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 OR4T1P-201ENST00000554933 911 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 OR4H12P-201ENST00000556269 907 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AP005901.4-201ENST00000577336 569 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC107294.3-201ENST00000609211 526 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AC096656.1-201ENST00000623826 1364 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 AL513302.2-201ENST00000562313 1842 ntBASIC2.82□□□□□ -1.96
HIST1H1AQ02539 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HIST1H1AQ02539 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.81□□□□□ -1.96
HIST1H1AQ02539 RNU1-75P-201ENST00000347264 129 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms