Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ATP5F1P6-201ENST00000402768 767 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 GSTM3P2-201ENST00000412746 530 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 RPS20P1-201ENST00000434853 354 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 ARL4AP1-201ENST00000503220 705 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AC017037.2-201ENST00000513850 890 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 SETP12-201ENST00000514068 805 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AP002812.4-201ENST00000532139 286 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC008638.3-201ENST00000603341 463 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 ATP1B3P1-201ENST00000605365 821 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 TCP1P3-201ENST00000414406 1498 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.04□□□□□ -2.08
HSPG2P98160 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HSPG2P98160 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 AL356057.1-202ENST00000402263 756 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 AC117434.1-201ENST00000419971 836 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 ARL4AP3-201ENST00000441452 574 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 RPS26P15-201ENST00000488067 348 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 KCTD9P6-201ENST00000522306 950 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.04□□□□□ -2.08
HSPG2P98160 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 MTCO1P9-201ENST00000505577 1534 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 AC125336.1-201ENST00000508893 2827 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 RSL24D1P4-201ENST00000400938 484 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.04□□□□□ -2.08
HSPG2P98160 RPL21P6-201ENST00000479171 504 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 TRBV12-1-201ENST00000479785 344 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AC019227.1-201ENST00000526902 510 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.04□□□□□ -2.08
HSPG2P98160 MIR7154-201ENST00000620673 73 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.04□□□□□ -2.08
HSPG2P98160 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 AL672167.1-206ENST00000356293 943 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 MTND4P22-201ENST00000413116 1169 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 NDUFB9P3-201ENST00000521269 501 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AP006245.1-201ENST00000522549 120 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 AC079600.2-201ENST00000550076 130 ntBASIC2.04□□□□□ -2.08
HSPG2P98160 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HSPG2P98160 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
HSPG2P98160 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HSPG2P98160 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.03□□□□□ -2.08
HSPG2P98160 ISCA1P6-201ENST00000427740 390 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 AC005189.1-201ENST00000431286 310 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 AL035458.1-201ENST00000433096 585 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 ELOCP8-201ENST00000439309 332 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 ELOCP15-201ENST00000442090 332 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 HSPE1P6-201ENST00000479457 291 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 HMGB3P13-201ENST00000511263 607 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 MTCO1P8-201ENST00000416914 1523 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.03□□□□□ -2.08
HSPG2P98160 AC090971.4-201ENST00000560291 1800 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
HSPG2P98160 HIGD1AP12-201ENST00000427832 281 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 AC110794.1-201ENST00000505816 425 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 PPBPP1-201ENST00000510807 373 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 AC026782.2-201ENST00000510845 636 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HSPG2P98160 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.03□□□□□ -2.08
HSPG2P98160 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 AC007496.3-201ENST00000624987 3443 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 NMD3P1-201ENST00000439704 1488 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HSPG2P98160 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 UBE3AP2-201ENST00000429033 2259 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 MOB1AP1-201ENST00000430903 535 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.03□□□□□ -2.08
HSPG2P98160 RNU6-513P-201ENST00000516104 104 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 RNU1-143P-201ENST00000516296 146 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 SUMO2P20-201ENST00000520803 283 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 OR4R3P-201ENST00000525084 838 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 OR4A12P-201ENST00000530847 918 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 U1.23-201ENST00000610293 146 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 RNU1-68P-201ENST00000615382 146 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 U1.39-201ENST00000621562 146 ntBASIC2.03□□□□□ -2.08
HSPG2P98160 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.03□□□□□ -2.08
HSPG2P98160 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
HSPG2P98160 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.03□□□□□ -2.08
HSPG2P98160 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms