Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP000873.1-201ENST00000463987 400 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 RPL23AP73-201ENST00000492507 471 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC108043.1-201ENST00000512696 574 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 RN7SKP83-201ENST00000516512 178 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 AC008489.1-201ENST00000524271 483 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 OR4C2P-201ENST00000530855 1064 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.27□□□□□ -1.89
H3F3AP84243 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3AP84243 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.27□□□□□ -1.89
H3F3AP84243 AL391497.1-201ENST00000608671 547 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AL592295.2-201ENST00000612578 206 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 RNVU1-4-201ENST00000612985 164 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
H3F3AP84243 AC139769.3-201ENST00000618383 175 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC116563.2-201ENST00000624751 535 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC092159.4-201ENST00000624944 550 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AL732372.2-225ENST00000642124 456 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
H3F3AP84243 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
H3F3AP84243 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
H3F3AP84243 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3AP84243 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3AP84243 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3AP84243 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3AP84243 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3AP84243 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 AC009237.5-201ENST00000414271 501 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3AP84243 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3AP84243 SDCBPP2-201ENST00000424643 885 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3AP84243 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 OR6C72P-201ENST00000451403 892 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 TVP23BP2-201ENST00000455082 615 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 MTCYBP14-201ENST00000457471 715 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3AP84243 AC004801.2-202ENST00000463559 283 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 RNU6-579P-201ENST00000516879 102 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 AC027281.1-201ENST00000574178 758 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 AC020914.6-201ENST00000594327 272 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 KLKP1-201ENST00000595979 403 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 AC115621.1-201ENST00000604653 858 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 AL109618.2-201ENST00000605527 211 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
H3F3AP84243 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3AP84243 SYT14P1-202ENST00000600441 1448 ntBASIC3.26□□□□□ -1.89
H3F3AP84243 AC006504.1-201ENST00000562493 3666 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3AP84243 DCAF13P1-201ENST00000495256 1330 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3AP84243 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 RNA5SP167-201ENST00000365461 116 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H3F3AP84243 RPL21P17-201ENST00000397467 475 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AC025750.1-201ENST00000399891 379 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 RNU6ATAC-201ENST00000408749 126 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 RAB9AP3-201ENST00000412737 573 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 SYF2P2-201ENST00000417620 583 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 PTP4A1P5-201ENST00000420305 455 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3AP84243 AL035246.1-201ENST00000433554 1255 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.25□□□□□ -1.89
H3F3AP84243 AC010655.1-201ENST00000449336 292 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 RAB9AP1-201ENST00000449393 573 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 HMGN2P7-201ENST00000456186 273 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 RNU7-170P-201ENST00000459303 61 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3AP84243 ACTR3P3-201ENST00000480448 893 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AL133372.1-201ENST00000493565 745 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 SNX5P1-201ENST00000505757 1041 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3AP84243 RNU1-95P-201ENST00000516357 160 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 RNU1-128P-201ENST00000516704 160 ntBASIC3.25□□□□□ -1.89
H3F3AP84243 PAICSP4-201ENST00000517543 1253 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms