Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC068831.8-201ENST00000620171 435 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC119674.1-212ENST00000641155 993 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 GABPAP-201ENST00000419271 1356 ntBASIC3.2□□□□□ -1.9
HIST1H3AP68431 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HIST1H3AP68431 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H3AP68431 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 RIOK3P1-201ENST00000418778 1528 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 RN7SKP280-201ENST00000364196 304 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 RNU6-1251P-201ENST00000364502 107 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 RPL32P23-201ENST00000397237 405 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 MTND2P15-201ENST00000418575 892 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC245517.2-201ENST00000442890 346 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 GAPDHP36-201ENST00000480688 918 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC093267.1-201ENST00000489176 961 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 MTATP6P22-201ENST00000507369 598 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC113398.2-201ENST00000507630 558 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AP000926.4-201ENST00000527351 454 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC023161.2-201ENST00000551218 780 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AL389895.1-201ENST00000554127 252 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC006270.2-201ENST00000578523 652 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AC016717.3-201ENST00000624730 554 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H3AP68431 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 AF127577.6-201ENST00000623352 2191 ntBASIC3.19□□□□□ -1.9
HIST1H3AP68431 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H3AP68431 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H3AP68431 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H3AP68431 RN7SKP227-201ENST00000364445 330 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 U8.11-201ENST00000384699 133 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 U8.12-201ENST00000384701 133 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 SNORD65-201ENST00000391079 73 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 RPL31P45-201ENST00000419532 356 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AL353898.1-201ENST00000444055 238 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 U8.18-201ENST00000459285 133 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 HMGB3P14-201ENST00000494195 599 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 NPM1P41-201ENST00000512920 831 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 RANP9-201ENST00000519957 271 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 AP006245.1-201ENST00000522549 120 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 MTND5P21-201ENST00000531961 522 ntBASIC3.18□□□□□ -1.9
HIST1H3AP68431 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H3AP68431 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms