Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC006989.1-201ENST00000427212 131 ntBASIC3.16□□□□□ -1.9
UBA52P62987 HIGD1AP4-201ENST00000430194 280 ntBASIC3.16□□□□□ -1.9
UBA52P62987 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.16□□□□□ -1.9
UBA52P62987 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.16□□□□□ -1.9
UBA52P62987 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.16□□□□□ -1.9
UBA52P62987 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.16□□□□□ -1.9
UBA52P62987 CYCSP53-201ENST00000455540 265 ntBASIC3.16□□□□□ -1.9
UBA52P62987 CEACAMP4-201ENST00000457676 421 ntBASIC3.16□□□□□ -1.9
UBA52P62987 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.16□□□□□ -1.9
UBA52P62987 AC021146.5-201ENST00000503544 545 ntBASIC3.16□□□□□ -1.9
UBA52P62987 DSTNP2-201ENST00000504533 515 ntBASIC3.16□□□□□ -1.9
UBA52P62987 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
UBA52P62987 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.16□□□□□ -1.9
UBA52P62987 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.16□□□□□ -1.9
UBA52P62987 IGKV2D-19-201ENST00000523346 262 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.16□□□□□ -1.9
UBA52P62987 OR8I1P-201ENST00000529291 931 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC084757.1-201ENST00000559987 490 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC037471.2-201ENST00000564941 598 ntBASIC3.16□□□□□ -1.9
UBA52P62987 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.16□□□□□ -1.9
UBA52P62987 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.16□□□□□ -1.9
UBA52P62987 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
UBA52P62987 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AL159169.3-201ENST00000608871 561 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AC016957.2-201ENST00000616998 848 ntBASIC3.16□□□□□ -1.9
UBA52P62987 AF001550.2-201ENST00000636643 217 ntBASIC3.16□□□□□ -1.9
UBA52P62987 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBA52P62987 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBA52P62987 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
UBA52P62987 AC114546.3-201ENST00000623582 1734 ntBASIC3.16□□□□□ -1.9
UBA52P62987 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBA52P62987 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.15□□□□□ -1.9
UBA52P62987 AC009229.4-201ENST00000623854 1947 ntBASIC3.15□□□□□ -1.9
UBA52P62987 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 SNORA9-201ENST00000384215 133 ntBASIC3.15□□□□□ -1.91
UBA52P62987 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 RNU2-65P-201ENST00000410162 185 ntBASIC3.15□□□□□ -1.91
UBA52P62987 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
UBA52P62987 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC068533.1-201ENST00000418542 415 ntBASIC3.15□□□□□ -1.91
UBA52P62987 MTND4LP13-201ENST00000425022 298 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.15□□□□□ -1.91
UBA52P62987 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.15□□□□□ -1.91
UBA52P62987 USP9YP31-201ENST00000431405 881 ntBASIC3.15□□□□□ -1.91
UBA52P62987 HMGN2P31-201ENST00000432430 273 ntBASIC3.15□□□□□ -1.91
UBA52P62987 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.15□□□□□ -1.91
UBA52P62987 RPL21P11-201ENST00000461458 483 ntBASIC3.15□□□□□ -1.91
UBA52P62987 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.15□□□□□ -1.91
UBA52P62987 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 NDUFA5P2-201ENST00000519723 344 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 AC006518.1-201ENST00000541449 943 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 AL845331.3-202ENST00000562856 261 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.15□□□□□ -1.91
UBA52P62987 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.15□□□□□ -1.91
UBA52P62987 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.15□□□□□ -1.91
UBA52P62987 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.15□□□□□ -1.91
UBA52P62987 AC083899.3-201ENST00000603413 594 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AL049634.3-201ENST00000604968 457 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.15□□□□□ -1.91
UBA52P62987 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.15□□□□□ -1.91
UBA52P62987 AC096577.2-201ENST00000611455 153 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AC015967.1-201ENST00000619893 476 ntBASIC3.15□□□□□ -1.91
UBA52P62987 AL357559.1-201ENST00000622228 274 ntBASIC3.15□□□□□ -1.91
UBA52P62987 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
UBA52P62987 AC132825.8-201ENST00000640783 297 ntBASIC3.15□□□□□ -1.91
UBA52P62987 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.15□□□□□ -1.91
UBA52P62987 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBA52P62987 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBA52P62987 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBA52P62987 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBA52P62987 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 XKRY2-202ENST00000623874 1581 ntBASIC3.14□□□□□ -1.91
UBA52P62987 XKRY-202ENST00000624960 1581 ntBASIC3.14□□□□□ -1.91
UBA52P62987 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBA52P62987 SKINT1L-201ENST00000401057 817 ntBASIC3.14□□□□□ -1.91
UBA52P62987 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AL139247.1-201ENST00000422768 325 ntBASIC3.14□□□□□ -1.91
UBA52P62987 OSTCP5-201ENST00000425293 453 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.14□□□□□ -1.91
UBA52P62987 HMGB3P10-201ENST00000434734 572 ntBASIC3.14□□□□□ -1.91
UBA52P62987 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms