Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC108120.2-201ENST00000512973 294 ntBASIC3.3□□□□□ -1.88
ACTBP60709 SNORA31.9-201ENST00000516429 84 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC138701.1-201ENST00000524329 714 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AP003730.1-201ENST00000524605 285 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AL139174.1-201ENST00000531489 886 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC091516.1-201ENST00000549191 703 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.3□□□□□ -1.88
ACTBP60709 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 MIR3939-201ENST00000582614 106 ntBASIC3.3□□□□□ -1.88
ACTBP60709 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 AC115085.1-201ENST00000588924 229 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.3□□□□□ -1.88
ACTBP60709 AC011468.4-201ENST00000603942 409 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AL137849.1-201ENST00000604767 169 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AL392112.1-201ENST00000605115 829 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AL445567.2-201ENST00000618935 498 ntBASIC3.3□□□□□ -1.88
ACTBP60709 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTBP60709 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ACTBP60709 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
ACTBP60709 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
ACTBP60709 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
ACTBP60709 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 AC026951.1-201ENST00000559530 2459 ntBASIC3.29□□□□□ -1.88
ACTBP60709 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AL049693.1-201ENST00000402760 611 ntBASIC3.29□□□□□ -1.88
ACTBP60709 HSPE1P12-201ENST00000412576 301 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 HIGD1AP12-201ENST00000427832 281 ntBASIC3.29□□□□□ -1.88
ACTBP60709 HMGB1P45-201ENST00000435986 653 ntBASIC3.29□□□□□ -1.88
ACTBP60709 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.29□□□□□ -1.88
ACTBP60709 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 RPL37P6-202ENST00000464216 403 ntBASIC3.29□□□□□ -1.88
ACTBP60709 RN7SL385P-201ENST00000468873 276 ntBASIC3.29□□□□□ -1.88
ACTBP60709 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 RN7SKP60-201ENST00000516985 239 ntBASIC3.29□□□□□ -1.88
ACTBP60709 SEC11B-201ENST00000518383 499 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC008489.1-201ENST00000524271 483 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC025857.1-201ENST00000525252 377 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 OR4A12P-201ENST00000530847 918 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC025260.1-201ENST00000548858 430 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AL389895.1-201ENST00000554127 252 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.29□□□□□ -1.88
ACTBP60709 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTBP60709 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC006116.5-201ENST00000591936 559 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC117490.2-201ENST00000610042 594 ntBASIC3.29□□□□□ -1.88
ACTBP60709 NF1P10-201ENST00000613227 742 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AC006338.2-201ENST00000616864 791 ntBASIC3.29□□□□□ -1.88
ACTBP60709 AL590410.1-201ENST00000617925 333 ntBASIC3.29□□□□□ -1.88
ACTBP60709 MIR6758-201ENST00000620653 63 ntBASIC3.29□□□□□ -1.88
ACTBP60709 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ACTBP60709 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTBP60709 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.29□□□□□ -1.88
ACTBP60709 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.29□□□□□ -1.88
ACTBP60709 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
ACTBP60709 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTBP60709 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ACTBP60709 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ACTBP60709 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ACTBP60709 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.28□□□□□ -1.88
ACTBP60709 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
ACTBP60709 RPS27AP11-201ENST00000402798 447 ntBASIC3.28□□□□□ -1.88
ACTBP60709 COX6CP15-201ENST00000426313 211 ntBASIC3.28□□□□□ -1.88
ACTBP60709 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
ACTBP60709 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.28□□□□□ -1.88
ACTBP60709 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.28□□□□□ -1.88
ACTBP60709 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.28□□□□□ -1.88
ACTBP60709 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.28□□□□□ -1.88
ACTBP60709 RPL21P11-201ENST00000461458 483 ntBASIC3.28□□□□□ -1.88
ACTBP60709 RPS20P21-201ENST00000466859 343 ntBASIC3.28□□□□□ -1.88
ACTBP60709 AC010618.1-201ENST00000469924 477 ntBASIC3.28□□□□□ -1.88
ACTBP60709 AC084198.1-201ENST00000477747 402 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms