Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 VN1R84P-201ENST00000593697 235 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AP003117.1-201ENST00000602771 554 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AC112230.1-201ENST00000604342 547 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AP003392.5-201ENST00000607857 415 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AL121772.2-201ENST00000614331 297 ntBASIC3.61□□□□□ -1.83
VSX2P58304 CR392039.5-201ENST00000623201 510 ntBASIC3.61□□□□□ -1.83
VSX2P58304 OR8B1P-202ENST00000641132 1178 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX2P58304 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX2P58304 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VSX2P58304 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.61□□□□□ -1.83
VSX2P58304 AC100871.1-201ENST00000507871 1456 ntBASIC3.6□□□□□ -1.83
VSX2P58304 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VSX2P58304 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 AC090229.1-201ENST00000590983 1609 ntBASIC3.6□□□□□ -1.83
VSX2P58304 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VSX2P58304 PTMAP2-201ENST00000397627 327 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AC010385.1-201ENST00000412374 256 ntBASIC3.6□□□□□ -1.83
VSX2P58304 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 AL445528.1-201ENST00000426330 420 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL390879.2-203ENST00000426943 1121 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.6□□□□□ -1.83
VSX2P58304 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
VSX2P58304 SNORA71B-202ENST00000439232 272 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
VSX2P58304 NANOGP10-201ENST00000453325 895 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.6□□□□□ -1.83
VSX2P58304 RNU7-27P-201ENST00000459281 62 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL133162.1-201ENST00000463228 453 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AC084198.1-201ENST00000477747 402 ntBASIC3.6□□□□□ -1.83
VSX2P58304 NIPA2P2-201ENST00000496376 1083 ntBASIC3.6□□□□□ -1.83
VSX2P58304 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 SMARCE1P4-201ENST00000523647 241 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 AC091515.1-201ENST00000548110 679 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.6□□□□□ -1.83
VSX2P58304 AC067805.1-201ENST00000559344 470 ntBASIC3.6□□□□□ -1.83
VSX2P58304 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 AC244505.7-201ENST00000599675 272 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL133247.2-201ENST00000603236 482 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
VSX2P58304 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
VSX2P58304 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 AL391497.1-201ENST00000608671 547 ntBASIC3.6□□□□□ -1.83
VSX2P58304 AC079684.1-201ENST00000621405 437 ntBASIC3.6□□□□□ -1.83
VSX2P58304 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX2P58304 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
VSX2P58304 AL139811.1-201ENST00000424779 2299 ntBASIC3.6□□□□□ -1.83
VSX2P58304 NCAPGP1-201ENST00000505112 1814 ntBASIC3.6□□□□□ -1.83
VSX2P58304 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX2P58304 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VSX2P58304 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VSX2P58304 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
VSX2P58304 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
VSX2P58304 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 RNA5SP124-201ENST00000362739 110 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.59□□□□□ -1.83
VSX2P58304 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 NPM1P34-201ENST00000428821 893 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AC018644.1-201ENST00000429934 551 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AL365396.1-201ENST00000430854 671 ntBASIC3.59□□□□□ -1.83
VSX2P58304 MTCO1P52-201ENST00000433928 531 ntBASIC3.59□□□□□ -1.83
VSX2P58304 ARL4AP4-201ENST00000434170 518 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.59□□□□□ -1.83
VSX2P58304 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.59□□□□□ -1.83
VSX2P58304 ANP32BP2-201ENST00000454525 545 ntBASIC3.59□□□□□ -1.83
VSX2P58304 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.59□□□□□ -1.83
VSX2P58304 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.59□□□□□ -1.83
VSX2P58304 AC093770.1-201ENST00000511559 571 ntBASIC3.59□□□□□ -1.83
VSX2P58304 SNORA48.9-201ENST00000516419 162 ntBASIC3.59□□□□□ -1.83
VSX2P58304 RNU6-1004P-201ENST00000516584 111 ntBASIC3.59□□□□□ -1.83
VSX2P58304 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.59□□□□□ -1.83
VSX2P58304 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.59□□□□□ -1.83
VSX2P58304 AL049844.2-201ENST00000604280 628 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AC090525.3-201ENST00000605601 189 ntBASIC3.59□□□□□ -1.83
VSX2P58304 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.59□□□□□ -1.83
VSX2P58304 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.59□□□□□ -1.83
VSX2P58304 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.59□□□□□ -1.83
VSX2P58304 AC039056.2-201ENST00000622261 511 ntBASIC3.59□□□□□ -1.83
VSX2P58304 AC007342.8-201ENST00000623278 678 ntBASIC3.59□□□□□ -1.83
VSX2P58304 CFTRP2-201ENST00000634304 199 ntBASIC3.59□□□□□ -1.83
VSX2P58304 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VSX2P58304 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.84
VSX2P58304 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.59□□□□□ -1.84
VSX2P58304 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.58□□□□□ -1.84
VSX2P58304 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VSX2P58304 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
VSX2P58304 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms