Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN6P56747 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN6P56747 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN6P56747 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN6P56747 RAD23BP3-201ENST00000454157 1152 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN6P56747 PRELID3BP7-201ENST00000503606 469 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN6P56747 GMPSP1-201ENST00000514075 579 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC016550.3-201ENST00000515706 767 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 RN7SKP18-201ENST00000516005 275 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC022790.1-201ENST00000522872 204 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC074029.2-201ENST00000551045 634 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN6P56747 AL161713.1-201ENST00000555538 145 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC023158.1-201ENST00000561632 1025 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN6P56747 MIR548Y-201ENST00000582739 110 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 MIR4298-201ENST00000584380 73 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN6P56747 AC012603.1-201ENST00000606424 528 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AL513477.2-201ENST00000607858 568 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC233309.1-201ENST00000619522 751 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 AC103858.2-201ENST00000621471 543 ntBASIC3.68□□□□□ -1.82
CLDN6P56747 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN6P56747 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN6P56747 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CLDN6P56747 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLDN6P56747 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN6P56747 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC083899.2-201ENST00000423285 1376 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CLDN6P56747 RNF6P1-201ENST00000444889 1784 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 Y_RNA.111-201ENST00000363248 100 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 RNU6-317P-201ENST00000384031 107 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 RNU6-185P-201ENST00000384421 107 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AL603766.1-201ENST00000407763 664 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC073063.1-201ENST00000434352 607 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 AP002345.1-201ENST00000456493 928 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 RPL6P9-201ENST00000466502 859 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 S100A11P1-201ENST00000477525 312 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN6P56747 HMGB1P47-201ENST00000511281 589 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN6P56747 RN7SKP57-201ENST00000517248 293 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN6P56747 OR4U1P-201ENST00000554958 912 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AC106785.3-201ENST00000564064 847 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN6P56747 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN6P56747 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 AC124312.6-202ENST00000623624 418 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 CR392039.4-201ENST00000624968 501 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN6P56747 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN6P56747 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN6P56747 ZNF833P-201ENST00000424938 1494 ntBASIC3.67□□□□□ -1.82
CLDN6P56747 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN6P56747 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN6P56747 AL353743.4-201ENST00000422653 1547 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN6P56747 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN6P56747 SNORA62.2-201ENST00000364672 152 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 RNA5SP267-201ENST00000364893 126 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 MIR634-201ENST00000385208 97 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 AC105402.1-201ENST00000413336 545 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 RPL7AP73-201ENST00000413490 353 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 RPS12P5-201ENST00000423449 371 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 YWHAEP5-201ENST00000431545 765 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 XKRYP6-201ENST00000440468 1116 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 XKRYP3-201ENST00000442113 1116 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN6P56747 TPMTP4-201ENST00000450749 678 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 RPL21P11-201ENST00000461458 483 ntBASIC3.66□□□□□ -1.82
CLDN6P56747 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN6P56747 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN6P56747 RN7SKP13-201ENST00000515933 244 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms