Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH13P55290 GTF2IP7-202ENST00000436677 309 ntBASIC4.2□□□□□ -1.74
CDH13P55290 HMGB1P16-201ENST00000447155 540 ntBASIC4.2□□□□□ -1.74
CDH13P55290 NF1P3-201ENST00000457709 450 ntBASIC4.2□□□□□ -1.74
CDH13P55290 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 DYNLL1P6-201ENST00000503440 264 ntBASIC4.2□□□□□ -1.74
CDH13P55290 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 AC011352.3-201ENST00000505162 593 ntBASIC4.2□□□□□ -1.74
CDH13P55290 SNX5P1-201ENST00000505757 1041 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH13P55290 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 MIR432-201ENST00000606207 94 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL354760.1-201ENST00000608357 643 ntBASIC4.2□□□□□ -1.74
CDH13P55290 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.2□□□□□ -1.74
CDH13P55290 MIR4727-201ENST00000622232 55 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AP006248.2-201ENST00000623309 592 ntBASIC4.2□□□□□ -1.74
CDH13P55290 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 ZNF663P-202ENST00000641770 1131 ntBASIC4.2□□□□□ -1.74
CDH13P55290 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL355578.1-201ENST00000607405 1328 ntBASIC4.2□□□□□ -1.74
CDH13P55290 ZNF962P-201ENST00000443465 3140 ntBASIC4.19□□□□□ -1.74
CDH13P55290 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH13P55290 AC097504.1-201ENST00000515103 2415 ntBASIC4.19□□□□□ -1.74
CDH13P55290 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 RNA5SP502-201ENST00000362694 119 ntBASIC4.19□□□□□ -1.74
CDH13P55290 SNORD74.4-201ENST00000364129 80 ntBASIC4.19□□□□□ -1.74
CDH13P55290 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
CDH13P55290 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 SNORD116-12-201ENST00000384468 92 ntBASIC4.19□□□□□ -1.74
CDH13P55290 SNORD116-23-201ENST00000384645 92 ntBASIC4.19□□□□□ -1.74
CDH13P55290 HSPD1P16-201ENST00000402302 394 ntBASIC4.19□□□□□ -1.74
CDH13P55290 MTCO3P31-201ENST00000405526 789 ntBASIC4.19□□□□□ -1.74
CDH13P55290 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH13P55290 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 NANOGP5-201ENST00000424456 877 ntBASIC4.19□□□□□ -1.74
CDH13P55290 RPP40P1-201ENST00000426762 456 ntBASIC4.19□□□□□ -1.74
CDH13P55290 ELOCP6-201ENST00000429066 328 ntBASIC4.19□□□□□ -1.74
CDH13P55290 IFNNP1-201ENST00000429219 553 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 USP9YP24-201ENST00000434374 697 ntBASIC4.19□□□□□ -1.74
CDH13P55290 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 USP9YP17-201ENST00000444617 696 ntBASIC4.19□□□□□ -1.74
CDH13P55290 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 ELOCP12-201ENST00000458706 328 ntBASIC4.19□□□□□ -1.74
CDH13P55290 RPL35AP28-201ENST00000459730 331 ntBASIC4.19□□□□□ -1.74
CDH13P55290 RPL23AP44-201ENST00000482216 473 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH13P55290 AC025674.1-201ENST00000507074 324 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC113347.3-201ENST00000509113 148 ntBASIC4.19□□□□□ -1.74
CDH13P55290 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 AC109471.1-201ENST00000511631 612 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 MTND2P26-201ENST00000528255 1029 ntBASIC4.19□□□□□ -1.74
CDH13P55290 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH13P55290 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH13P55290 AL132857.1-201ENST00000555180 708 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 MTCYBP28-201ENST00000566728 1132 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC074051.3-201ENST00000570238 358 ntBASIC4.19□□□□□ -1.74
CDH13P55290 MIR3912-201ENST00000577566 105 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH13P55290 MTCO2P2-201ENST00000591258 225 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AL035411.2-201ENST00000604022 421 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AC115286.1-201ENST00000604298 434 ntBASIC4.19□□□□□ -1.74
CDH13P55290 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH13P55290 RNU4-5P-201ENST00000607255 135 ntBASIC4.19□□□□□ -1.74
CDH13P55290 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 MIR6730-201ENST00000622213 67 ntBASIC4.19□□□□□ -1.74
CDH13P55290 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 AL512506.2-201ENST00000624472 458 ntBASIC4.19□□□□□ -1.74
CDH13P55290 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH13P55290 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH13P55290 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 DHX40P1-201ENST00000588725 1412 ntBASIC4.19□□□□□ -1.74
CDH13P55290 ZNF33CP-201ENST00000432492 2030 ntBASIC4.19□□□□□ -1.74
CDH13P55290 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.19□□□□□ -1.74
CDH13P55290 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH13P55290 AC006971.1-201ENST00000407916 4486 ntBASIC4.19□□□□□ -1.74
CDH13P55290 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms