Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LIMK1P53667 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LIMK1P53667 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LIMK1P53667 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LIMK1P53667 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LIMK1P53667 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LIMK1P53667 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 AC135352.1-201ENST00000506173 1418 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK1P53667 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 RNU1-130P-201ENST00000363930 160 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LIMK1P53667 MIR921-201ENST00000401133 56 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RNU2-6P-201ENST00000411404 190 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK1P53667 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RPL21P43-201ENST00000425440 472 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RPL21P110-201ENST00000433345 446 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RPS7P2-201ENST00000435134 607 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 HMGB1P45-201ENST00000435986 653 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC000041.1-201ENST00000439655 175 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC073522.1-201ENST00000483312 377 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 VN1R105P-201ENST00000486595 910 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RPL35P6-201ENST00000490024 372 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 RPS4XP18-201ENST00000495480 763 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK1P53667 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK1P53667 AC124293.1-201ENST00000530034 493 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.39□□□□□ -1.71
LIMK1P53667 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK1P53667 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK1P53667 SLC25A36P1-201ENST00000590111 465 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.39□□□□□ -1.71
LIMK1P53667 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK1P53667 AC009948.4-201ENST00000604692 675 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC112503.1-201ENST00000608436 391 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC013468.1-201ENST00000608680 598 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AF129408.1-201ENST00000608767 431 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC234782.5-201ENST00000617723 324 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC022306.3-201ENST00000619930 550 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC009269.6-201ENST00000621778 588 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AL391262.2-201ENST00000622466 494 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 AC140479.6-201ENST00000633535 357 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LIMK1P53667 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LIMK1P53667 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 MAPK10-303ENST00000641324 3959 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK1P53667 MTCO1P6-201ENST00000481192 1384 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 CASC19-261ENST00000641853 1638 ntBASIC4.39□□□□□ -1.71
LIMK1P53667 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK1P53667 MARK2P15-201ENST00000432204 2186 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 NSRP1P1-201ENST00000444067 1693 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK1P53667 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 RNU1-108P-201ENST00000362556 161 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 RNU6-925P-201ENST00000384629 104 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 MIR7-3-201ENST00000384898 110 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AL161909.1-201ENST00000397390 712 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK1P53667 HDGFP1-201ENST00000405943 252 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 VDAC1P9-201ENST00000412766 841 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK1P53667 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK1P53667 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 HSFY7P-201ENST00000432672 318 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 BTF3P10-201ENST00000433415 495 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 HSFY8P-201ENST00000437934 318 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC004865.1-201ENST00000442276 1003 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AL162151.2-201ENST00000448875 158 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK1P53667 HSFY5P-201ENST00000453726 309 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 BX248409.1-201ENST00000455497 255 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 DHFRP3-201ENST00000455595 559 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK1P53667 FCF1P6-201ENST00000456841 595 ntBASIC4.38□□□□□ -1.71
LIMK1P53667 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK1P53667 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms