Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC092045.1-201ENST00000495716 1231 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.42□□□□□ -1.7
PGGT1BP53609 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AP000619.3-201ENST00000535634 1127 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AC092851.1-201ENST00000535964 478 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC027104.1-201ENST00000563702 681 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AC002400.1-201ENST00000569310 726 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AC011260.1-201ENST00000578420 472 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AP005262.1-201ENST00000582646 997 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 MIR548Y-201ENST00000582739 110 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 VN1R84P-201ENST00000593697 235 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AL031985.2-201ENST00000600955 480 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AC107304.1-201ENST00000604229 296 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 Z98200.1-201ENST00000607298 470 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 AL133243.1-201ENST00000614487 366 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AL158063.1-201ENST00000615349 536 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC022509.4-201ENST00000621404 572 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.42□□□□□ -1.7
PGGT1BP53609 AC090582.1-201ENST00000636321 199 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 FP325313.1-201ENST00000638228 703 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.42□□□□□ -1.7
PGGT1BP53609 MTND4P31-201ENST00000425607 1343 ntBASIC4.42□□□□□ -1.7
PGGT1BP53609 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PGGT1BP53609 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PGGT1BP53609 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PGGT1BP53609 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PGGT1BP53609 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AL356473.1-201ENST00000406203 1408 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PGGT1BP53609 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PGGT1BP53609 RNU5A-2P-201ENST00000384337 116 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PGGT1BP53609 RNA5SP372-201ENST00000390836 115 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AL583835.1-201ENST00000399570 407 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.41□□□□□ -1.7
PGGT1BP53609 Z98745.1-201ENST00000402553 494 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AF274854.1-201ENST00000413236 615 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC009237.10-201ENST00000414112 510 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 OR6C64P-201ENST00000419708 825 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC006366.1-201ENST00000422002 759 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PGGT1BP53609 RPEP3-201ENST00000425462 676 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 PRELID3BP10-201ENST00000431957 584 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AL049745.1-201ENST00000433953 286 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC079776.3-201ENST00000450665 370 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC243772.1-201ENST00000451620 410 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 DNAJC19P8-201ENST00000452887 259 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC010326.1-201ENST00000462726 602 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 RN7SL610P-201ENST00000463845 291 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 GAPDHP36-201ENST00000480688 918 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC104687.1-201ENST00000485829 412 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC105185.1-201ENST00000518705 535 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 NDUFA5P2-201ENST00000519723 344 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.41□□□□□ -1.7
PGGT1BP53609 MIR3912-201ENST00000577566 105 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 MIR4443-201ENST00000585052 53 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.41□□□□□ -1.7
PGGT1BP53609 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.41□□□□□ -1.7
PGGT1BP53609 AF131215.7-201ENST00000602443 707 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 BPIFA4P-203ENST00000603168 689 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AC005084.1-201ENST00000605160 304 ntBASIC4.41□□□□□ -1.7
PGGT1BP53609 AL021997.1-201ENST00000605757 193 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms